Gene : Glyma.18G301600 G. max Wm82.a2.v1
Defline:  (1 of 12) PF03114 - BAR domain Genomic Order:  3016
Name:  ? Glyma.18G301600 Secondary Identifier:  ? PAC:30555565
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G301600 0.5kb upstream 0.5kb upstream 6361 true Chr18: 57938968-57945328 Glycine max
Glyma.18G301600 0.5kb upstream 0.5kb upstream 500 false Chr18: 57938968-57939467 Glycine max
Glyma.18G301600 0.5kb downstream 0.5kb downstream 6361 true Chr18: 57939468-57945828 Glycine max
Glyma.18G301600 0.5kb downstream 0.5kb downstream 500 false Chr18: 57945329-57945828 Glycine max
Glyma.18G301600 1.0kb upstream 1.0kb upstream 6861 true Chr18: 57938468-57945328 Glycine max
Glyma.18G301600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57938468-57939467 Glycine max
Glyma.18G301600 1.0kb downstream 1.0kb downstream 6861 true Chr18: 57939468-57946328 Glycine max
Glyma.18G301600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57945329-57946328 Glycine max
Glyma.18G301600 2.0kb upstream 2.0kb upstream 7861 true Chr18: 57937468-57945328 Glycine max
Glyma.18G301600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57937468-57939467 Glycine max
Glyma.18G301600 2.0kb downstream 2.0kb downstream 7861 true Chr18: 57939468-57947328 Glycine max
Glyma.18G301600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57945329-57947328 Glycine max
Glyma.18G301600 5.0kb upstream 5.0kb upstream 10861 true Chr18: 57934468-57945328 Glycine max
Glyma.18G301600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57934468-57939467 Glycine max
Glyma.18G301600 5.0kb downstream 5.0kb downstream 10861 true Chr18: 57939468-57950328 Glycine max
Glyma.18G301600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57945329-57950328 Glycine max
Glyma.18G301600 10.0kb upstream 10.0kb upstream 15861 true Chr18: 57929468-57945328 Glycine max
Glyma.18G301600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57929468-57939467 Glycine max
Glyma.18G301600 10.0kb downstream 10.0kb downstream 15861 true Chr18: 57939468-57955328 Glycine max
Glyma.18G301600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57945329-57955328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302700 5265 Fabidae View MSA
124070616 5270 Rosid View MSA
123745722 5271 Pentapetalae View MSA
122786878 5272 Eudicot View MSA
122041909 5273 Angiosperm View MSA
121348701 5274 Embryophyte View MSA
123380980 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.3066 0.0 69.0173   High
cufflinks 8.13979 0.0 28.7103    
cufflinks 18.4904 0.0 65.4356   High
cufflinks 8.40975 0.0 29.4378    
cufflinks 8.61525 0.0 30.1962    
cufflinks 19.2282 0.0 69.4707   High
cufflinks 13.9667 0.0 53.2056    
cufflinks 7.13411 0.0 25.5566   Low
cufflinks 7.84094 0.0 27.7372    
cufflinks 1.214       Low
cufflinks 4.147       High
cufflinks 2.913        
cufflinks 2.004        
cufflinks 1.159       Low
cufflinks 1.314       Low
cufflinks 1.993        
cufflinks 3.911       High
cufflinks 2.471        
cufflinks 2.25        
cufflinks 2.07        
cufflinks 3.665        
cufflinks 2.588        
cufflinks 1.97        
cufflinks 5.959       High
cufflinks 1.941        
cufflinks 3.499        

0 Strain