Gene : Glyma.02G038700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Genomic Order:  387
Name:  ? Glyma.02G038700 Secondary Identifier:  ? PAC:30507210
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G038700 0.5kb upstream 0.5kb upstream 1664 true Chr02: 3616109-3617772 Glycine max
Glyma.02G038700 0.5kb upstream 0.5kb upstream 500 false Chr02: 3617273-3617772 Glycine max
Glyma.02G038700 0.5kb downstream 0.5kb downstream 1664 true Chr02: 3615609-3617272 Glycine max
Glyma.02G038700 0.5kb downstream 0.5kb downstream 500 false Chr02: 3615609-3616108 Glycine max
Glyma.02G038700 1.0kb upstream 1.0kb upstream 2164 true Chr02: 3616109-3618272 Glycine max
Glyma.02G038700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3617273-3618272 Glycine max
Glyma.02G038700 1.0kb downstream 1.0kb downstream 2164 true Chr02: 3615109-3617272 Glycine max
Glyma.02G038700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3615109-3616108 Glycine max
Glyma.02G038700 2.0kb upstream 2.0kb upstream 3164 true Chr02: 3616109-3619272 Glycine max
Glyma.02G038700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3617273-3619272 Glycine max
Glyma.02G038700 2.0kb downstream 2.0kb downstream 3164 true Chr02: 3614109-3617272 Glycine max
Glyma.02G038700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3614109-3616108 Glycine max
Glyma.02G038700 5.0kb upstream 5.0kb upstream 6164 true Chr02: 3616109-3622272 Glycine max
Glyma.02G038700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3617273-3622272 Glycine max
Glyma.02G038700 5.0kb downstream 5.0kb downstream 6164 true Chr02: 3611109-3617272 Glycine max
Glyma.02G038700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3611109-3616108 Glycine max
Glyma.02G038700 10.0kb upstream 10.0kb upstream 11164 true Chr02: 3616109-3627272 Glycine max
Glyma.02G038700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3617273-3627272 Glycine max
Glyma.02G038700 10.0kb downstream 10.0kb downstream 11164 true Chr02: 3606109-3617272 Glycine max
Glyma.02G038700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3606109-3616108 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296238 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.2671 0.0 155.187 High  
cufflinks 38.5142 0.0 102.876 High  
cufflinks 20.0453 0.0 54.1647   Low
cufflinks 29.5238 0.0 78.8021 High  
cufflinks 82.0433 0.0 229.761 High  
cufflinks 54.5486 0.0 147.676 High  
cufflinks 120.783 0.0 354.701 High High
cufflinks 42.1602 0.0 112.829 High  
cufflinks 55.9122 0.0 151.527 High  
cufflinks 22.433     High  
cufflinks 11.32     High Low
cufflinks 19.569     High  
cufflinks 56.879     High High
cufflinks 83.745     High High
cufflinks 14.175     High  
cufflinks 22.06     High  
cufflinks 19.121     High  
cufflinks 20.088     High  
cufflinks 23.483     High  
cufflinks 17.602     High  
cufflinks 15.796     High  
cufflinks 17.779     High  
cufflinks 27.758     High  
cufflinks 12.92     High Low
cufflinks 19.038     High  
cufflinks 21.465     High  

0 Strain