Gene : Glyma.02G036900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  369
Name:  ? Glyma.02G036900 Secondary Identifier:  ? PAC:30507852
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G036900 0.5kb upstream 0.5kb upstream 9939 true Chr02: 3431090-3441028 Glycine max
Glyma.02G036900 0.5kb upstream 0.5kb upstream 500 false Chr02: 3431090-3431589 Glycine max
Glyma.02G036900 0.5kb downstream 0.5kb downstream 9939 true Chr02: 3431590-3441528 Glycine max
Glyma.02G036900 0.5kb downstream 0.5kb downstream 500 false Chr02: 3441029-3441528 Glycine max
Glyma.02G036900 1.0kb upstream 1.0kb upstream 10439 true Chr02: 3430590-3441028 Glycine max
Glyma.02G036900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3430590-3431589 Glycine max
Glyma.02G036900 1.0kb downstream 1.0kb downstream 10439 true Chr02: 3431590-3442028 Glycine max
Glyma.02G036900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3441029-3442028 Glycine max
Glyma.02G036900 2.0kb upstream 2.0kb upstream 11439 true Chr02: 3429590-3441028 Glycine max
Glyma.02G036900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3429590-3431589 Glycine max
Glyma.02G036900 2.0kb downstream 2.0kb downstream 11439 true Chr02: 3431590-3443028 Glycine max
Glyma.02G036900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3441029-3443028 Glycine max
Glyma.02G036900 5.0kb upstream 5.0kb upstream 14439 true Chr02: 3426590-3441028 Glycine max
Glyma.02G036900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3426590-3431589 Glycine max
Glyma.02G036900 5.0kb downstream 5.0kb downstream 14439 true Chr02: 3431590-3446028 Glycine max
Glyma.02G036900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3441029-3446028 Glycine max
Glyma.02G036900 10.0kb upstream 10.0kb upstream 19439 true Chr02: 3421590-3441028 Glycine max
Glyma.02G036900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3421590-3431589 Glycine max
Glyma.02G036900 10.0kb downstream 10.0kb downstream 19439 true Chr02: 3431590-3451028 Glycine max
Glyma.02G036900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3441029-3451028 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310769 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.175359 0.0 0.686748 Low Low
cufflinks 2.96146 0.0 9.59403    
cufflinks 4.38867 0.0 13.5027    
cufflinks 0.6362 0.0 2.35573    
cufflinks 2.29341 0.0 7.63253    
cufflinks 6.06532 0.0 17.6993    
cufflinks 0.324042 0.0 1.23712   Low
cufflinks 8.77729 0.0 24.5793   High
cufflinks 2.16173 0.0 7.27403    
cufflinks 0.933       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.53       High
cufflinks 0.044     Low  
cufflinks 0.225        
cufflinks 0.01     Low  
cufflinks 0.006     Low Low
cufflinks 0.064     Low  
cufflinks 0.484       High
cufflinks 0.455       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.035     Low  
cufflinks 0.004     Low Low
cufflinks 0.007     Low Low

0 Strain