Gene : Glyma.02G043400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21311 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8 Genomic Order:  434
Name:  ? Glyma.02G043400 Secondary Identifier:  ? PAC:30510872
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G043400 0.5kb upstream 0.5kb upstream 6606 true Chr02: 4049655-4056260 Glycine max
Glyma.02G043400 0.5kb upstream 0.5kb upstream 500 false Chr02: 4055761-4056260 Glycine max
Glyma.02G043400 0.5kb downstream 0.5kb downstream 6606 true Chr02: 4049155-4055760 Glycine max
Glyma.02G043400 0.5kb downstream 0.5kb downstream 500 false Chr02: 4049155-4049654 Glycine max
Glyma.02G043400 1.0kb upstream 1.0kb upstream 7106 true Chr02: 4049655-4056760 Glycine max
Glyma.02G043400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4055761-4056760 Glycine max
Glyma.02G043400 1.0kb downstream 1.0kb downstream 7106 true Chr02: 4048655-4055760 Glycine max
Glyma.02G043400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4048655-4049654 Glycine max
Glyma.02G043400 2.0kb upstream 2.0kb upstream 8106 true Chr02: 4049655-4057760 Glycine max
Glyma.02G043400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4055761-4057760 Glycine max
Glyma.02G043400 2.0kb downstream 2.0kb downstream 8106 true Chr02: 4047655-4055760 Glycine max
Glyma.02G043400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4047655-4049654 Glycine max
Glyma.02G043400 5.0kb upstream 5.0kb upstream 11106 true Chr02: 4049655-4060760 Glycine max
Glyma.02G043400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4055761-4060760 Glycine max
Glyma.02G043400 5.0kb downstream 5.0kb downstream 11106 true Chr02: 4044655-4055760 Glycine max
Glyma.02G043400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4044655-4049654 Glycine max
Glyma.02G043400 10.0kb upstream 10.0kb upstream 16106 true Chr02: 4049655-4065760 Glycine max
Glyma.02G043400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4055761-4065760 Glycine max
Glyma.02G043400 10.0kb downstream 10.0kb downstream 16106 true Chr02: 4039655-4055760 Glycine max
Glyma.02G043400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4039655-4049654 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307006 5265 Fabidae View MSA
124061559 5270 Rosid View MSA
123740845 5271 Pentapetalae View MSA
122786873 5272 Eudicot View MSA
122042545 5273 Angiosperm View MSA
121347456 5274 Embryophyte View MSA
123426400 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7082 0.0 33.9096    
cufflinks 7.34394 0.0 19.9574   Low
cufflinks 7.71861 0.0 20.9062   Low
cufflinks 11.6786 0.0 31.1877    
cufflinks 14.3299 0.0 38.2402   High
cufflinks 10.1165 0.0 27.0907    
cufflinks 7.98816 0.0 21.6276   Low
cufflinks 15.4416 0.0 41.2395   High
cufflinks 10.9526 0.0 29.2772    
cufflinks 6.82       High
cufflinks 1.974       Low
cufflinks 3.467        
cufflinks 7.381     High High
cufflinks 9.179     High High
cufflinks 2.071       Low
cufflinks 3.975        
cufflinks 3.044        
cufflinks 4.714        
cufflinks 3.935        
cufflinks 3.445        
cufflinks 3.328        
cufflinks 4.015        
cufflinks 3.703        
cufflinks 3.364        
cufflinks 3.51        
cufflinks 3.37        

0 Strain