Gene : Glyma.02G041900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21152:SF1 - PHOSPHOSERINE AMINOTRANSFERASE Genomic Order:  419
Name:  ? Glyma.02G041900 Secondary Identifier:  ? PAC:30508438
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax SER-GLYSYN-PWY Glycine max pathologic  
Gmax SERSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G041900 0.5kb upstream 0.5kb upstream 2514 true Chr02: 3951373-3953886 Glycine max
Glyma.02G041900 0.5kb upstream 0.5kb upstream 500 false Chr02: 3951373-3951872 Glycine max
Glyma.02G041900 0.5kb downstream 0.5kb downstream 2514 true Chr02: 3951873-3954386 Glycine max
Glyma.02G041900 0.5kb downstream 0.5kb downstream 500 false Chr02: 3953887-3954386 Glycine max
Glyma.02G041900 1.0kb upstream 1.0kb upstream 3014 true Chr02: 3950873-3953886 Glycine max
Glyma.02G041900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3950873-3951872 Glycine max
Glyma.02G041900 1.0kb downstream 1.0kb downstream 3014 true Chr02: 3951873-3954886 Glycine max
Glyma.02G041900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3953887-3954886 Glycine max
Glyma.02G041900 2.0kb upstream 2.0kb upstream 4014 true Chr02: 3949873-3953886 Glycine max
Glyma.02G041900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3949873-3951872 Glycine max
Glyma.02G041900 2.0kb downstream 2.0kb downstream 4014 true Chr02: 3951873-3955886 Glycine max
Glyma.02G041900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3953887-3955886 Glycine max
Glyma.02G041900 5.0kb upstream 5.0kb upstream 7014 true Chr02: 3946873-3953886 Glycine max
Glyma.02G041900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3946873-3951872 Glycine max
Glyma.02G041900 5.0kb downstream 5.0kb downstream 7014 true Chr02: 3951873-3958886 Glycine max
Glyma.02G041900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3953887-3958886 Glycine max
Glyma.02G041900 10.0kb upstream 10.0kb upstream 12014 true Chr02: 3941873-3953886 Glycine max
Glyma.02G041900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3941873-3951872 Glycine max
Glyma.02G041900 10.0kb downstream 10.0kb downstream 12014 true Chr02: 3951873-3963886 Glycine max
Glyma.02G041900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3953887-3963886 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307465 5265 Fabidae View MSA
124074701 5270 Rosid View MSA
123739926 5271 Pentapetalae View MSA
122788097 5272 Eudicot View MSA
122043165 5273 Angiosperm View MSA
121346366 5274 Embryophyte View MSA
123424895 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.81936 0.0 13.8684    
cufflinks 8.3703 0.0 22.8846    
cufflinks 4.37933 0.0 12.8341    
cufflinks 7.40921 0.0 20.4201    
cufflinks 5.97727 0.0 16.7274    
cufflinks 11.3002 0.0 30.3426   High
cufflinks 3.22449 0.0 9.75419   Low
cufflinks 9.68485 0.0 26.205    
cufflinks 8.64716 0.0 23.5418    
cufflinks 4.171        
cufflinks 7.253     High  
cufflinks 2.85       Low
cufflinks 3.887        
cufflinks 3.808        
cufflinks 23.031     High High
cufflinks 4.286        
cufflinks 7.218     High  
cufflinks 3.849        
cufflinks 10.852     High High
cufflinks 2.469       Low
cufflinks 15.235     High High
cufflinks 3.239        
cufflinks 5.497        
cufflinks 7.423     High  
cufflinks 3.051        
cufflinks 11.386     High High

0 Strain