Gene : Glyma.02G040900 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  409
Name:  ? Glyma.02G040900 Secondary Identifier:  ? PAC:30507739
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G040900 0.5kb upstream 0.5kb upstream 8033 true Chr02: 3849228-3857260 Glycine max
Glyma.02G040900 0.5kb upstream 0.5kb upstream 500 false Chr02: 3849228-3849727 Glycine max
Glyma.02G040900 0.5kb downstream 0.5kb downstream 8033 true Chr02: 3849728-3857760 Glycine max
Glyma.02G040900 0.5kb downstream 0.5kb downstream 500 false Chr02: 3857261-3857760 Glycine max
Glyma.02G040900 1.0kb upstream 1.0kb upstream 8533 true Chr02: 3848728-3857260 Glycine max
Glyma.02G040900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3848728-3849727 Glycine max
Glyma.02G040900 1.0kb downstream 1.0kb downstream 8533 true Chr02: 3849728-3858260 Glycine max
Glyma.02G040900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3857261-3858260 Glycine max
Glyma.02G040900 2.0kb upstream 2.0kb upstream 9533 true Chr02: 3847728-3857260 Glycine max
Glyma.02G040900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3847728-3849727 Glycine max
Glyma.02G040900 2.0kb downstream 2.0kb downstream 9533 true Chr02: 3849728-3859260 Glycine max
Glyma.02G040900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3857261-3859260 Glycine max
Glyma.02G040900 5.0kb upstream 5.0kb upstream 12533 true Chr02: 3844728-3857260 Glycine max
Glyma.02G040900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3844728-3849727 Glycine max
Glyma.02G040900 5.0kb downstream 5.0kb downstream 12533 true Chr02: 3849728-3862260 Glycine max
Glyma.02G040900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3857261-3862260 Glycine max
Glyma.02G040900 10.0kb upstream 10.0kb upstream 17533 true Chr02: 3839728-3857260 Glycine max
Glyma.02G040900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3839728-3849727 Glycine max
Glyma.02G040900 10.0kb downstream 10.0kb downstream 17533 true Chr02: 3849728-3867260 Glycine max
Glyma.02G040900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3857261-3867260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309003 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98843 0.0 16.0462    
cufflinks 4.9119 0.0 13.2673    
cufflinks 2.89021 0.0 8.10764   Low
cufflinks 7.96906 0.0 21.2604   High
cufflinks 3.30469 0.0 9.1747   Low
cufflinks 3.81808 0.0 10.474    
cufflinks 7.9548 0.0 21.2229   High
cufflinks 5.4061 0.0 14.5353    
cufflinks 4.70686 0.0 12.7379    
cufflinks 3.739        
cufflinks 0.425       Low
cufflinks 2.936        
cufflinks 3.085        
cufflinks 2.501        
cufflinks 1.539        
cufflinks 2.823        
cufflinks 1.031        
cufflinks 4.345       High
cufflinks 4.063        
cufflinks 3.69        
cufflinks 0.664       Low
cufflinks 3.886        
cufflinks 2.888        
cufflinks 0.782       Low
cufflinks 3.002        
cufflinks 0.887       Low

0 Strain