Gene : Glyma.02G047200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22601//PTHR22601:SF12 - ISP4 LIKE PROTEIN Genomic Order:  472
Name:  ? Glyma.02G047200 Secondary Identifier:  ? PAC:30507699
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G047200 0.5kb upstream 0.5kb upstream 6453 true Chr02: 4337018-4343470 Glycine max
Glyma.02G047200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4337018-4337517 Glycine max
Glyma.02G047200 0.5kb downstream 0.5kb downstream 6453 true Chr02: 4337518-4343970 Glycine max
Glyma.02G047200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4343471-4343970 Glycine max
Glyma.02G047200 1.0kb upstream 1.0kb upstream 6953 true Chr02: 4336518-4343470 Glycine max
Glyma.02G047200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4336518-4337517 Glycine max
Glyma.02G047200 1.0kb downstream 1.0kb downstream 6953 true Chr02: 4337518-4344470 Glycine max
Glyma.02G047200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4343471-4344470 Glycine max
Glyma.02G047200 2.0kb upstream 2.0kb upstream 7953 true Chr02: 4335518-4343470 Glycine max
Glyma.02G047200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4335518-4337517 Glycine max
Glyma.02G047200 2.0kb downstream 2.0kb downstream 7953 true Chr02: 4337518-4345470 Glycine max
Glyma.02G047200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4343471-4345470 Glycine max
Glyma.02G047200 5.0kb upstream 5.0kb upstream 10953 true Chr02: 4332518-4343470 Glycine max
Glyma.02G047200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4332518-4337517 Glycine max
Glyma.02G047200 5.0kb downstream 5.0kb downstream 10953 true Chr02: 4337518-4348470 Glycine max
Glyma.02G047200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4343471-4348470 Glycine max
Glyma.02G047200 10.0kb upstream 10.0kb upstream 15953 true Chr02: 4327518-4343470 Glycine max
Glyma.02G047200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4327518-4337517 Glycine max
Glyma.02G047200 10.0kb downstream 10.0kb downstream 15953 true Chr02: 4337518-4353470 Glycine max
Glyma.02G047200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4343471-4353470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303018 5265 Fabidae View MSA
124073714 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.663076 0.0 3.87937    
cufflinks 0.289345 0.0 1.43546    
cufflinks 1.18239 0.0 5.97952    
cufflinks 0.223024 0.0 1.08003    
cufflinks 2.92487 0.0 11.1478   High
cufflinks 8.30236 0.0 28.9872   High
cufflinks 0.420737 0.0 1.95555    
cufflinks 0.0994966 0.0 0.390267 Low Low
cufflinks 1.18072 0.0 5.98236    
cufflinks 0.033     Low Low
cufflinks 0.615       High
cufflinks 0.095     Low  
cufflinks 0.366        
cufflinks 0.335        
cufflinks 0.183        
cufflinks 0.064     Low Low
cufflinks 0.848       High
cufflinks 0.175        
cufflinks 0.119        
cufflinks 0.071     Low  
cufflinks 0.533        
cufflinks 0.093     Low  
cufflinks 0.084     Low  
cufflinks 0.921       High
cufflinks 0.062     Low Low
cufflinks 1.046       High

0 Strain