Gene : Glyma.19G000900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11937//PTHR11937:SF218 - ACTIN Genomic Order:  9
Name:  ? Glyma.19G000900 Secondary Identifier:  ? PAC:30514264
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G000900 0.5kb upstream 0.5kb upstream 4278 true Chr19: 68866-73143 Glycine max
Glyma.19G000900 0.5kb upstream 0.5kb upstream 500 false Chr19: 68866-69365 Glycine max
Glyma.19G000900 0.5kb downstream 0.5kb downstream 4278 true Chr19: 69366-73643 Glycine max
Glyma.19G000900 0.5kb downstream 0.5kb downstream 500 false Chr19: 73144-73643 Glycine max
Glyma.19G000900 1.0kb upstream 1.0kb upstream 4778 true Chr19: 68366-73143 Glycine max
Glyma.19G000900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 68366-69365 Glycine max
Glyma.19G000900 1.0kb downstream 1.0kb downstream 4778 true Chr19: 69366-74143 Glycine max
Glyma.19G000900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 73144-74143 Glycine max
Glyma.19G000900 2.0kb upstream 2.0kb upstream 5778 true Chr19: 67366-73143 Glycine max
Glyma.19G000900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 67366-69365 Glycine max
Glyma.19G000900 2.0kb downstream 2.0kb downstream 5778 true Chr19: 69366-75143 Glycine max
Glyma.19G000900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 73144-75143 Glycine max
Glyma.19G000900 5.0kb upstream 5.0kb upstream 8778 true Chr19: 64366-73143 Glycine max
Glyma.19G000900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 64366-69365 Glycine max
Glyma.19G000900 5.0kb downstream 5.0kb downstream 8778 true Chr19: 69366-78143 Glycine max
Glyma.19G000900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 73144-78143 Glycine max
Glyma.19G000900 10.0kb upstream 10.0kb upstream 13778 true Chr19: 59366-73143 Glycine max
Glyma.19G000900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 59366-69365 Glycine max
Glyma.19G000900 10.0kb downstream 10.0kb downstream 13778 true Chr19: 69366-83143 Glycine max
Glyma.19G000900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 73144-83143 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316606 5265 Fabidae View MSA
124074063 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.0431 0.0 62.5558 High High
cufflinks 12.8938 0.0 34.3991    
cufflinks 8.03352 0.0 21.6502    
cufflinks 5.34808 0.0 14.8307   Low
cufflinks 13.9183 0.0 37.139    
cufflinks 15.6526 0.0 41.8423    
cufflinks 11.9143 0.0 31.804    
cufflinks 16.357 0.0 43.7578    
cufflinks 7.14188 0.0 19.3956   Low
cufflinks 10.804     High  
cufflinks 3.068       Low
cufflinks 5.025        
cufflinks 12.963     High High
cufflinks 16.62     High High
cufflinks 5.05        
cufflinks 9.321     High  
cufflinks 4.302        
cufflinks 12.631     High  
cufflinks 11.072     High  
cufflinks 6.919     High  
cufflinks 5.377        
cufflinks 7.593     High  
cufflinks 13.402     High High
cufflinks 1.524       Low
cufflinks 7.744     High  
cufflinks 5.567        

0 Strain