Gene : Glyma.02G045700 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR11165 - SKP1 Genomic Order:  457
Name:  ? Glyma.02G045700 Secondary Identifier:  ? PAC:30510998
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G045700 0.5kb upstream 0.5kb upstream 2299 true Chr02: 4203772-4206070 Glycine max
Glyma.02G045700 0.5kb upstream 0.5kb upstream 500 false Chr02: 4205571-4206070 Glycine max
Glyma.02G045700 0.5kb downstream 0.5kb downstream 2299 true Chr02: 4203272-4205570 Glycine max
Glyma.02G045700 0.5kb downstream 0.5kb downstream 500 false Chr02: 4203272-4203771 Glycine max
Glyma.02G045700 1.0kb upstream 1.0kb upstream 2799 true Chr02: 4203772-4206570 Glycine max
Glyma.02G045700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4205571-4206570 Glycine max
Glyma.02G045700 1.0kb downstream 1.0kb downstream 2799 true Chr02: 4202772-4205570 Glycine max
Glyma.02G045700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4202772-4203771 Glycine max
Glyma.02G045700 2.0kb upstream 2.0kb upstream 3799 true Chr02: 4203772-4207570 Glycine max
Glyma.02G045700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4205571-4207570 Glycine max
Glyma.02G045700 2.0kb downstream 2.0kb downstream 3799 true Chr02: 4201772-4205570 Glycine max
Glyma.02G045700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4201772-4203771 Glycine max
Glyma.02G045700 5.0kb upstream 5.0kb upstream 6799 true Chr02: 4203772-4210570 Glycine max
Glyma.02G045700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4205571-4210570 Glycine max
Glyma.02G045700 5.0kb downstream 5.0kb downstream 6799 true Chr02: 4198772-4205570 Glycine max
Glyma.02G045700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4198772-4203771 Glycine max
Glyma.02G045700 10.0kb upstream 10.0kb upstream 11799 true Chr02: 4203772-4215570 Glycine max
Glyma.02G045700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4205571-4215570 Glycine max
Glyma.02G045700 10.0kb downstream 10.0kb downstream 11799 true Chr02: 4193772-4205570 Glycine max
Glyma.02G045700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4193772-4203771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303733 5265 Fabidae View MSA
124067462 5270 Rosid View MSA
123744391 5271 Pentapetalae View MSA
122796189 5272 Eudicot View MSA
122048755 5273 Angiosperm View MSA
121348588 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.5357 0.0 84.2492 High Low
cufflinks 58.7154 0.0 158.326 High  
cufflinks 31.2511 0.0 83.5106 High Low
cufflinks 49.2849 0.0 132.083 High  
cufflinks 37.0855 0.0 98.9444 High  
cufflinks 61.1761 0.0 165.447 High  
cufflinks 76.9193 0.0 211.456 High High
cufflinks 59.2351 0.0 160.001 High  
cufflinks 46.6239 0.0 124.742 High  
cufflinks 19.18     High  
cufflinks 11.669     High Low
cufflinks 17.058     High  
cufflinks 19.369     High  
cufflinks 18.667     High  
cufflinks 14.734     High  
cufflinks 17.87     High  
cufflinks 14.468     High Low
cufflinks 18.173     High  
cufflinks 23.391     High High
cufflinks 17.918     High  
cufflinks 14.129     High Low
cufflinks 18.13     High  
cufflinks 18.035     High  
cufflinks 15.167     High  
cufflinks 17.768     High  
cufflinks 15.848     High  

0 Strain