Gene : Glyma.02G044800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13018//PTHR13018:SF52 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED Genomic Order:  448
Name:  ? Glyma.02G044800 Secondary Identifier:  ? PAC:30506330
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G044800 0.5kb upstream 0.5kb upstream 3685 true Chr02: 4144708-4148392 Glycine max
Glyma.02G044800 0.5kb upstream 0.5kb upstream 500 false Chr02: 4144708-4145207 Glycine max
Glyma.02G044800 0.5kb downstream 0.5kb downstream 3685 true Chr02: 4145208-4148892 Glycine max
Glyma.02G044800 0.5kb downstream 0.5kb downstream 500 false Chr02: 4148393-4148892 Glycine max
Glyma.02G044800 1.0kb upstream 1.0kb upstream 4185 true Chr02: 4144208-4148392 Glycine max
Glyma.02G044800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4144208-4145207 Glycine max
Glyma.02G044800 1.0kb downstream 1.0kb downstream 4185 true Chr02: 4145208-4149392 Glycine max
Glyma.02G044800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4148393-4149392 Glycine max
Glyma.02G044800 2.0kb upstream 2.0kb upstream 5185 true Chr02: 4143208-4148392 Glycine max
Glyma.02G044800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4143208-4145207 Glycine max
Glyma.02G044800 2.0kb downstream 2.0kb downstream 5185 true Chr02: 4145208-4150392 Glycine max
Glyma.02G044800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4148393-4150392 Glycine max
Glyma.02G044800 5.0kb upstream 5.0kb upstream 8185 true Chr02: 4140208-4148392 Glycine max
Glyma.02G044800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4140208-4145207 Glycine max
Glyma.02G044800 5.0kb downstream 5.0kb downstream 8185 true Chr02: 4145208-4153392 Glycine max
Glyma.02G044800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4148393-4153392 Glycine max
Glyma.02G044800 10.0kb upstream 10.0kb upstream 13185 true Chr02: 4135208-4148392 Glycine max
Glyma.02G044800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4135208-4145207 Glycine max
Glyma.02G044800 10.0kb downstream 10.0kb downstream 13185 true Chr02: 4145208-4158392 Glycine max
Glyma.02G044800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4148393-4158392 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301090 5265 Fabidae View MSA
124065906 5270 Rosid View MSA
123738845 5271 Pentapetalae View MSA
122789158 5272 Eudicot View MSA
122043002 5273 Angiosperm View MSA
121310062 5274 Embryophyte View MSA
123347658 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.97976 0.0 11.2573    
cufflinks 1.92891 0.0 6.01404   Low
cufflinks 8.54582 0.0 22.9309   High
cufflinks 4.01436 0.0 11.3623    
cufflinks 3.71906 0.0 10.5753    
cufflinks 4.70683 0.0 13.0736    
cufflinks 3.77457 0.0 10.728    
cufflinks 3.9407 0.0 11.1843    
cufflinks 3.32516 0.0 9.60314    
cufflinks 2.228        
cufflinks 5.026       High
cufflinks 4.505        
cufflinks 2.361        
cufflinks 1.69       Low
cufflinks 5.131       High
cufflinks 2.3        
cufflinks 4.873       High
cufflinks 3.326        
cufflinks 2.155        
cufflinks 2.455        
cufflinks 5.294       High
cufflinks 2.551        
cufflinks 2.125        
cufflinks 4.738       High
cufflinks 2.18        
cufflinks 4.887       High

0 Strain