Gene : Glyma.02G050200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR10263:SF13 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C4 Genomic Order:  502
Name:  ? Glyma.02G050200 Secondary Identifier:  ? PAC:30507388
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G050200 0.5kb upstream 0.5kb upstream 2984 true Chr02: 4558613-4561596 Glycine max
Glyma.02G050200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4558613-4559112 Glycine max
Glyma.02G050200 0.5kb downstream 0.5kb downstream 2984 true Chr02: 4559113-4562096 Glycine max
Glyma.02G050200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4561597-4562096 Glycine max
Glyma.02G050200 1.0kb upstream 1.0kb upstream 3484 true Chr02: 4558113-4561596 Glycine max
Glyma.02G050200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4558113-4559112 Glycine max
Glyma.02G050200 1.0kb downstream 1.0kb downstream 3484 true Chr02: 4559113-4562596 Glycine max
Glyma.02G050200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4561597-4562596 Glycine max
Glyma.02G050200 2.0kb upstream 2.0kb upstream 4484 true Chr02: 4557113-4561596 Glycine max
Glyma.02G050200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4557113-4559112 Glycine max
Glyma.02G050200 2.0kb downstream 2.0kb downstream 4484 true Chr02: 4559113-4563596 Glycine max
Glyma.02G050200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4561597-4563596 Glycine max
Glyma.02G050200 5.0kb upstream 5.0kb upstream 7484 true Chr02: 4554113-4561596 Glycine max
Glyma.02G050200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4554113-4559112 Glycine max
Glyma.02G050200 5.0kb downstream 5.0kb downstream 7484 true Chr02: 4559113-4566596 Glycine max
Glyma.02G050200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4561597-4566596 Glycine max
Glyma.02G050200 10.0kb upstream 10.0kb upstream 12484 true Chr02: 4549113-4561596 Glycine max
Glyma.02G050200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4549113-4559112 Glycine max
Glyma.02G050200 10.0kb downstream 10.0kb downstream 12484 true Chr02: 4559113-4571596 Glycine max
Glyma.02G050200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4561597-4571596 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315068 5265 Fabidae View MSA
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5759 0.0 50.2582   Low
cufflinks 20.2133 0.0 63.1318 High  
cufflinks 15.7906 0.0 51.6907   Low
cufflinks 19.2696 0.0 60.7731    
cufflinks 23.846 0.0 110.296 High  
cufflinks 32.6641 0.0 97.1488 High High
cufflinks 17.0523 0.0 54.39    
cufflinks 31.4394 0.0 143.823 High High
cufflinks 19.3724 0.0 60.3806    
cufflinks 8.221     High High
cufflinks 1.405       Low
cufflinks 3.319        
cufflinks 5.861       High
cufflinks 6.41       High
cufflinks 1.087       Low
cufflinks 2.797        
cufflinks 2.459        
cufflinks 5.094        
cufflinks 5.234       High
cufflinks 2.024        
cufflinks 1.418       Low
cufflinks 2.612        
cufflinks 3.512        
cufflinks 1.797        
cufflinks 2.004        
cufflinks 1.843        

0 Strain