Gene : Glyma.19G001600 G. max Wm82.a2.v1
Defline:  (1 of 18) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  16
Name:  ? Glyma.19G001600 Secondary Identifier:  ? PAC:30511914
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G001600 0.5kb upstream 0.5kb upstream 3732 true Chr19: 117044-120775 Glycine max
Glyma.19G001600 0.5kb upstream 0.5kb upstream 500 false Chr19: 117044-117543 Glycine max
Glyma.19G001600 0.5kb downstream 0.5kb downstream 3732 true Chr19: 117544-121275 Glycine max
Glyma.19G001600 0.5kb downstream 0.5kb downstream 500 false Chr19: 120776-121275 Glycine max
Glyma.19G001600 1.0kb upstream 1.0kb upstream 4232 true Chr19: 116544-120775 Glycine max
Glyma.19G001600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 116544-117543 Glycine max
Glyma.19G001600 1.0kb downstream 1.0kb downstream 4232 true Chr19: 117544-121775 Glycine max
Glyma.19G001600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 120776-121775 Glycine max
Glyma.19G001600 2.0kb upstream 2.0kb upstream 5232 true Chr19: 115544-120775 Glycine max
Glyma.19G001600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 115544-117543 Glycine max
Glyma.19G001600 2.0kb downstream 2.0kb downstream 5232 true Chr19: 117544-122775 Glycine max
Glyma.19G001600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 120776-122775 Glycine max
Glyma.19G001600 5.0kb upstream 5.0kb upstream 8232 true Chr19: 112544-120775 Glycine max
Glyma.19G001600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 112544-117543 Glycine max
Glyma.19G001600 5.0kb downstream 5.0kb downstream 8232 true Chr19: 117544-125775 Glycine max
Glyma.19G001600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 120776-125775 Glycine max
Glyma.19G001600 10.0kb upstream 10.0kb upstream 13232 true Chr19: 107544-120775 Glycine max
Glyma.19G001600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 107544-117543 Glycine max
Glyma.19G001600 10.0kb downstream 10.0kb downstream 13232 true Chr19: 117544-130775 Glycine max
Glyma.19G001600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 120776-130775 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296423 5265 Fabidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0131648 0.0 1.42066 Low Low
cufflinks 0.303757 0.0 148.11    
cufflinks 0.198262 0.0 177.351 Low  
cufflinks 0.818116 0.0 12.5246    
cufflinks 24.0502 0.0 230.97 High High
cufflinks 10.5266 0.0 187.988   High
cufflinks 0.335583 0.0 12.9978    
cufflinks 0.1347 0.0 105.657 Low  
cufflinks 4.16524 0.0 131.51    
cufflinks 0.007     Low Low
cufflinks 3.587        
cufflinks 0.356        
cufflinks 13.374     High High
cufflinks 14.185     High High
cufflinks 1.549        
cufflinks 0.066     Low  
cufflinks 2.08        
cufflinks 0.627        
cufflinks 0.142        
cufflinks 0.047     Low Low
cufflinks 4.855        
cufflinks 0.049     Low  
cufflinks 0.034     Low Low
cufflinks 3.27        
cufflinks 0.067     Low  
cufflinks 6.548     High High

0 Strain