Gene : Glyma.02G050500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11010//PTHR11010:SF42 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED Genomic Order:  505
Name:  ? Glyma.02G050500 Secondary Identifier:  ? PAC:30510803
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G050500 0.5kb upstream 0.5kb upstream 3622 true Chr02: 4592056-4595677 Glycine max
Glyma.02G050500 0.5kb upstream 0.5kb upstream 500 false Chr02: 4592056-4592555 Glycine max
Glyma.02G050500 0.5kb downstream 0.5kb downstream 3622 true Chr02: 4592556-4596177 Glycine max
Glyma.02G050500 0.5kb downstream 0.5kb downstream 500 false Chr02: 4595678-4596177 Glycine max
Glyma.02G050500 1.0kb upstream 1.0kb upstream 4122 true Chr02: 4591556-4595677 Glycine max
Glyma.02G050500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4591556-4592555 Glycine max
Glyma.02G050500 1.0kb downstream 1.0kb downstream 4122 true Chr02: 4592556-4596677 Glycine max
Glyma.02G050500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4595678-4596677 Glycine max
Glyma.02G050500 2.0kb upstream 2.0kb upstream 5122 true Chr02: 4590556-4595677 Glycine max
Glyma.02G050500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4590556-4592555 Glycine max
Glyma.02G050500 2.0kb downstream 2.0kb downstream 5122 true Chr02: 4592556-4597677 Glycine max
Glyma.02G050500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4595678-4597677 Glycine max
Glyma.02G050500 5.0kb upstream 5.0kb upstream 8122 true Chr02: 4587556-4595677 Glycine max
Glyma.02G050500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4587556-4592555 Glycine max
Glyma.02G050500 5.0kb downstream 5.0kb downstream 8122 true Chr02: 4592556-4600677 Glycine max
Glyma.02G050500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4595678-4600677 Glycine max
Glyma.02G050500 10.0kb upstream 10.0kb upstream 13122 true Chr02: 4582556-4595677 Glycine max
Glyma.02G050500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4582556-4592555 Glycine max
Glyma.02G050500 10.0kb downstream 10.0kb downstream 13122 true Chr02: 4592556-4605677 Glycine max
Glyma.02G050500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4595678-4605677 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781479 5273 Angiosperm View MSA
122241466 5265 Fabidae Singleton cluster - no MSA
123986329 5270 Rosid Singleton cluster - no MSA
123749732 5271 Pentapetalae View MSA
122773289 5272 Eudicot View MSA
121053054 5274 Embryophyte View MSA
123093084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00277977 0.0 0.0202832 Low  
cufflinks 0.0350736 0.0 0.155726 Low  
cufflinks 0.0232462 0.0 0.106798 Low  
cufflinks 0.0218125 0.0 0.101054 Low  
cufflinks 0.0302452 0.0 0.13627 Low  
cufflinks 0.0559708 0.0 0.239128 Low High
cufflinks 0.00765876 0.0 0.0401441 Low  
cufflinks 8.28794E-4 0.0 0.0102269 Low Low
cufflinks 0.00355885 0.0 0.0230396 Low  
cufflinks 0.057     Low Low
cufflinks 0.074        
cufflinks 0.353       High
cufflinks 0.196        
cufflinks 0.097        
cufflinks 0.017     Low Low
cufflinks 0.118        
cufflinks 0.168        
cufflinks 0.219        
cufflinks 0.128        
cufflinks 0.185        
cufflinks 0.12        
cufflinks 0.122        
cufflinks 0.093     Low  
cufflinks 0.128        
cufflinks 0.185        
cufflinks 0.25       High

0 Strain