Gene : Glyma.02G049100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31161:SF6 - KINECTIN-RELATED PROTEIN Genomic Order:  491
Name:  ? Glyma.02G049100 Secondary Identifier:  ? PAC:30508148
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G049100 0.5kb upstream 0.5kb upstream 5043 true Chr02: 4469356-4474398 Glycine max
Glyma.02G049100 0.5kb upstream 0.5kb upstream 500 false Chr02: 4469356-4469855 Glycine max
Glyma.02G049100 0.5kb downstream 0.5kb downstream 5043 true Chr02: 4469856-4474898 Glycine max
Glyma.02G049100 0.5kb downstream 0.5kb downstream 500 false Chr02: 4474399-4474898 Glycine max
Glyma.02G049100 1.0kb upstream 1.0kb upstream 5543 true Chr02: 4468856-4474398 Glycine max
Glyma.02G049100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4468856-4469855 Glycine max
Glyma.02G049100 1.0kb downstream 1.0kb downstream 5543 true Chr02: 4469856-4475398 Glycine max
Glyma.02G049100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4474399-4475398 Glycine max
Glyma.02G049100 2.0kb upstream 2.0kb upstream 6543 true Chr02: 4467856-4474398 Glycine max
Glyma.02G049100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4467856-4469855 Glycine max
Glyma.02G049100 2.0kb downstream 2.0kb downstream 6543 true Chr02: 4469856-4476398 Glycine max
Glyma.02G049100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4474399-4476398 Glycine max
Glyma.02G049100 5.0kb upstream 5.0kb upstream 9543 true Chr02: 4464856-4474398 Glycine max
Glyma.02G049100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4464856-4469855 Glycine max
Glyma.02G049100 5.0kb downstream 5.0kb downstream 9543 true Chr02: 4469856-4479398 Glycine max
Glyma.02G049100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4474399-4479398 Glycine max
Glyma.02G049100 10.0kb upstream 10.0kb upstream 14543 true Chr02: 4459856-4474398 Glycine max
Glyma.02G049100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4459856-4469855 Glycine max
Glyma.02G049100 10.0kb downstream 10.0kb downstream 14543 true Chr02: 4469856-4484398 Glycine max
Glyma.02G049100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4474399-4484398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314136 5265 Fabidae View MSA
124067949 5270 Rosid View MSA
123741403 5271 Pentapetalae View MSA
122792089 5272 Eudicot View MSA
122046615 5273 Angiosperm View MSA
121343979 5274 Embryophyte View MSA
123379950 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.313 0.0 27.8684   Low
cufflinks 16.4996 0.0 44.0192    
cufflinks 22.9041 0.0 61.5136 High High
cufflinks 24.2876 0.0 65.2926 High High
cufflinks 10.2333 0.0 27.6862   Low
cufflinks 19.4801 0.0 52.0214    
cufflinks 15.3405 0.0 40.9644    
cufflinks 18.0115 0.0 48.0694    
cufflinks 16.5012 0.0 44.0242    
cufflinks 7.507        
cufflinks 11.163     High High
cufflinks 10.229     High High
cufflinks 6.14        
cufflinks 5.287        
cufflinks 4.329       Low
cufflinks 6.898        
cufflinks 3.727       Low
cufflinks 7.384     High  
cufflinks 7.23        
cufflinks 7.814     High  
cufflinks 9.544     High High
cufflinks 7.421     High  
cufflinks 5.478        
cufflinks 9.618     High High
cufflinks 8.228     High  
cufflinks 5.368        

0 Strain