Gene : Glyma.02G049500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10657:SF4 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 Genomic Order:  495
Name:  ? Glyma.02G049500 Secondary Identifier:  ? PAC:30510710
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G049500 0.5kb upstream 0.5kb upstream 3097 true Chr02: 4495718-4498814 Glycine max
Glyma.02G049500 0.5kb upstream 0.5kb upstream 500 false Chr02: 4495718-4496217 Glycine max
Glyma.02G049500 0.5kb downstream 0.5kb downstream 3097 true Chr02: 4496218-4499314 Glycine max
Glyma.02G049500 0.5kb downstream 0.5kb downstream 500 false Chr02: 4498815-4499314 Glycine max
Glyma.02G049500 1.0kb upstream 1.0kb upstream 3597 true Chr02: 4495218-4498814 Glycine max
Glyma.02G049500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4495218-4496217 Glycine max
Glyma.02G049500 1.0kb downstream 1.0kb downstream 3597 true Chr02: 4496218-4499814 Glycine max
Glyma.02G049500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4498815-4499814 Glycine max
Glyma.02G049500 2.0kb upstream 2.0kb upstream 4597 true Chr02: 4494218-4498814 Glycine max
Glyma.02G049500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4494218-4496217 Glycine max
Glyma.02G049500 2.0kb downstream 2.0kb downstream 4597 true Chr02: 4496218-4500814 Glycine max
Glyma.02G049500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4498815-4500814 Glycine max
Glyma.02G049500 5.0kb upstream 5.0kb upstream 7597 true Chr02: 4491218-4498814 Glycine max
Glyma.02G049500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4491218-4496217 Glycine max
Glyma.02G049500 5.0kb downstream 5.0kb downstream 7597 true Chr02: 4496218-4503814 Glycine max
Glyma.02G049500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4498815-4503814 Glycine max
Glyma.02G049500 10.0kb upstream 10.0kb upstream 12597 true Chr02: 4486218-4498814 Glycine max
Glyma.02G049500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4486218-4496217 Glycine max
Glyma.02G049500 10.0kb downstream 10.0kb downstream 12597 true Chr02: 4496218-4508814 Glycine max
Glyma.02G049500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4498815-4508814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305373 5265 Fabidae View MSA
124061766 5270 Rosid View MSA
123750072 5271 Pentapetalae View MSA
122789506 5272 Eudicot View MSA
122046490 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121345205 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.5203 0.0 102.783 High  
cufflinks 28.4438 0.0 76.1475 High  
cufflinks 21.9875 0.0 59.4996 High Low
cufflinks 22.7839 0.0 61.4684 High Low
cufflinks 37.3809 0.0 99.7512 High  
cufflinks 49.3862 0.0 132.456 High High
cufflinks 25.086 0.0 67.4278 High  
cufflinks 38.8935 0.0 103.782 High  
cufflinks 35.2949 0.0 94.1647 High  
cufflinks 11.285     High  
cufflinks 9.552     High  
cufflinks 7.853     High Low
cufflinks 12.938     High High
cufflinks 15.169     High High
cufflinks 10.99     High  
cufflinks 10.638     High  
cufflinks 8.294     High Low
cufflinks 9.793     High  
cufflinks 9.315     High  
cufflinks 9.705     High  
cufflinks 9.916     High  
cufflinks 9.816     High  
cufflinks 9.242     High  
cufflinks 10.049     High  
cufflinks 10.448     High  
cufflinks 10.572     High  

0 Strain