Gene : Glyma.02G047900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24078:SF231 - CHAPERONE PROTEIN DNAJ Genomic Order:  479
Name:  ? Glyma.02G047900 Secondary Identifier:  ? PAC:30510286
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G047900 0.5kb upstream 0.5kb upstream 1406 true Chr02: 4402299-4403704 Glycine max
Glyma.02G047900 0.5kb upstream 0.5kb upstream 500 false Chr02: 4403205-4403704 Glycine max
Glyma.02G047900 0.5kb downstream 0.5kb downstream 1406 true Chr02: 4401799-4403204 Glycine max
Glyma.02G047900 0.5kb downstream 0.5kb downstream 500 false Chr02: 4401799-4402298 Glycine max
Glyma.02G047900 1.0kb upstream 1.0kb upstream 1906 true Chr02: 4402299-4404204 Glycine max
Glyma.02G047900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4403205-4404204 Glycine max
Glyma.02G047900 1.0kb downstream 1.0kb downstream 1906 true Chr02: 4401299-4403204 Glycine max
Glyma.02G047900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4401299-4402298 Glycine max
Glyma.02G047900 2.0kb upstream 2.0kb upstream 2906 true Chr02: 4402299-4405204 Glycine max
Glyma.02G047900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4403205-4405204 Glycine max
Glyma.02G047900 2.0kb downstream 2.0kb downstream 2906 true Chr02: 4400299-4403204 Glycine max
Glyma.02G047900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4400299-4402298 Glycine max
Glyma.02G047900 5.0kb upstream 5.0kb upstream 5906 true Chr02: 4402299-4408204 Glycine max
Glyma.02G047900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4403205-4408204 Glycine max
Glyma.02G047900 5.0kb downstream 5.0kb downstream 5906 true Chr02: 4397299-4403204 Glycine max
Glyma.02G047900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4397299-4402298 Glycine max
Glyma.02G047900 10.0kb upstream 10.0kb upstream 10906 true Chr02: 4402299-4413204 Glycine max
Glyma.02G047900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4403205-4413204 Glycine max
Glyma.02G047900 10.0kb downstream 10.0kb downstream 10906 true Chr02: 4392299-4403204 Glycine max
Glyma.02G047900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4392299-4402298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241525 5265 Fabidae Singleton cluster - no MSA
124071980 5270 Rosid View MSA
123753518 5271 Pentapetalae View MSA
122797813 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.68795 0.0 6.10613    
cufflinks 1.12593 0.0 4.17628    
cufflinks 1.09916 0.0 4.09021    
cufflinks 2.17854 0.0 7.76368   High
cufflinks 0.945673 0.0 3.52247    
cufflinks 0.68365 0.0 2.58908   Low
cufflinks 1.06781 0.0 3.95737    
cufflinks 2.14393 0.0 7.65597   High
cufflinks 0.910728 0.0 3.40598    
cufflinks 1.581       High
cufflinks 0.503        
cufflinks 0.737        
cufflinks 0.368        
cufflinks 0.416        
cufflinks 0.223       Low
cufflinks 1.676       High
cufflinks 0.928        
cufflinks 0.698        
cufflinks 0.49        
cufflinks 1.048        
cufflinks 0.336       Low
cufflinks 1.079        
cufflinks 1.049        
cufflinks 0.313       Low
cufflinks 1.04        
cufflinks 0.548        

0 Strain