Gene : Glyma.02G048000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24078//PTHR24078:SF222 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  480
Name:  ? Glyma.02G048000 Secondary Identifier:  ? PAC:30507008
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G048000 0.5kb upstream 0.5kb upstream 1115 true Chr02: 4407580-4408694 Glycine max
Glyma.02G048000 0.5kb upstream 0.5kb upstream 500 false Chr02: 4408195-4408694 Glycine max
Glyma.02G048000 0.5kb downstream 0.5kb downstream 1115 true Chr02: 4407080-4408194 Glycine max
Glyma.02G048000 0.5kb downstream 0.5kb downstream 500 false Chr02: 4407080-4407579 Glycine max
Glyma.02G048000 1.0kb upstream 1.0kb upstream 1615 true Chr02: 4407580-4409194 Glycine max
Glyma.02G048000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4408195-4409194 Glycine max
Glyma.02G048000 1.0kb downstream 1.0kb downstream 1615 true Chr02: 4406580-4408194 Glycine max
Glyma.02G048000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4406580-4407579 Glycine max
Glyma.02G048000 2.0kb upstream 2.0kb upstream 2615 true Chr02: 4407580-4410194 Glycine max
Glyma.02G048000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4408195-4410194 Glycine max
Glyma.02G048000 2.0kb downstream 2.0kb downstream 2615 true Chr02: 4405580-4408194 Glycine max
Glyma.02G048000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4405580-4407579 Glycine max
Glyma.02G048000 5.0kb upstream 5.0kb upstream 5615 true Chr02: 4407580-4413194 Glycine max
Glyma.02G048000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4408195-4413194 Glycine max
Glyma.02G048000 5.0kb downstream 5.0kb downstream 5615 true Chr02: 4402580-4408194 Glycine max
Glyma.02G048000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4402580-4407579 Glycine max
Glyma.02G048000 10.0kb upstream 10.0kb upstream 10615 true Chr02: 4407580-4418194 Glycine max
Glyma.02G048000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4408195-4418194 Glycine max
Glyma.02G048000 10.0kb downstream 10.0kb downstream 10615 true Chr02: 4397580-4408194 Glycine max
Glyma.02G048000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4397580-4407579 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254180 5265 Fabidae View MSA
124071980 5270 Rosid View MSA
123753518 5271 Pentapetalae View MSA
122797813 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.305476 0.0 1.21593    
cufflinks 0.174552 0.0 0.712132 Low  
cufflinks 5.28898 0.0 18.195   High
cufflinks 0.798213 0.0 3.06268    
cufflinks 0.102313 0.0 0.428164 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.179595 0.0 0.728514 Low  
cufflinks 0.436614 0.0 1.71639    
cufflinks 0.0428611 0.0 0.19386 Low Low
cufflinks 0.244        
cufflinks 0.458        
cufflinks 3.21       High
cufflinks 0.207        
cufflinks 0.129       Low
cufflinks 0.311        
cufflinks 0.481        
cufflinks 0.817       High
cufflinks 0.306        
cufflinks 0.077     Low Low
cufflinks 0.582        
cufflinks 0.205        
cufflinks 0.353        
cufflinks 0.224        
cufflinks 0.281        
cufflinks 0.197        
cufflinks 0.613        

0 Strain