Gene : Glyma.02G054400 G. max Wm82.a2.v1
Genomic Order:  544 Name:  ? Glyma.02G054400
Secondary Identifier:  ? PAC:30509464
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G054400 0.5kb upstream 0.5kb upstream 2597 true Chr02: 4934648-4937244 Glycine max
Glyma.02G054400 0.5kb upstream 0.5kb upstream 500 false Chr02: 4936745-4937244 Glycine max
Glyma.02G054400 0.5kb downstream 0.5kb downstream 2597 true Chr02: 4934148-4936744 Glycine max
Glyma.02G054400 0.5kb downstream 0.5kb downstream 500 false Chr02: 4934148-4934647 Glycine max
Glyma.02G054400 1.0kb upstream 1.0kb upstream 3097 true Chr02: 4934648-4937744 Glycine max
Glyma.02G054400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4936745-4937744 Glycine max
Glyma.02G054400 1.0kb downstream 1.0kb downstream 3097 true Chr02: 4933648-4936744 Glycine max
Glyma.02G054400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4933648-4934647 Glycine max
Glyma.02G054400 2.0kb upstream 2.0kb upstream 4097 true Chr02: 4934648-4938744 Glycine max
Glyma.02G054400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4936745-4938744 Glycine max
Glyma.02G054400 2.0kb downstream 2.0kb downstream 4097 true Chr02: 4932648-4936744 Glycine max
Glyma.02G054400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4932648-4934647 Glycine max
Glyma.02G054400 5.0kb upstream 5.0kb upstream 7097 true Chr02: 4934648-4941744 Glycine max
Glyma.02G054400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4936745-4941744 Glycine max
Glyma.02G054400 5.0kb downstream 5.0kb downstream 7097 true Chr02: 4929648-4936744 Glycine max
Glyma.02G054400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4929648-4934647 Glycine max
Glyma.02G054400 10.0kb upstream 10.0kb upstream 12097 true Chr02: 4934648-4946744 Glycine max
Glyma.02G054400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4936745-4946744 Glycine max
Glyma.02G054400 10.0kb downstream 10.0kb downstream 12097 true Chr02: 4924648-4936744 Glycine max
Glyma.02G054400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4924648-4934647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309187 5265 Fabidae View MSA
124074138 5270 Rosid View MSA
123749937 5271 Pentapetalae View MSA
122792999 5272 Eudicot View MSA
122042966 5273 Angiosperm View MSA
121310057 5274 Embryophyte View MSA
123347654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0687091 0.0 0.279908 Low Low
cufflinks 0.885274 0.0 3.23665    
cufflinks 6.54154 0.0 19.3607   High
cufflinks 1.1771 0.0 4.22504    
cufflinks 1.12671 0.0 4.03106    
cufflinks 0.21954 0.0 0.854144 Low  
cufflinks 1.01471 0.0 3.66864    
cufflinks 0.656087 0.0 2.43736    
cufflinks 1.10168 0.0 3.96445    
cufflinks 0.362        
cufflinks 0.027     Low Low
cufflinks 1.837       High
cufflinks 0.135        
cufflinks 0.038     Low  
cufflinks 0.026     Low Low
cufflinks 0.307        
cufflinks 0.043     Low  
cufflinks 0.446       High
cufflinks 0.442       High
cufflinks 0.144        
cufflinks 0.048     Low  
cufflinks 0.131        
cufflinks 0.151        
cufflinks 0.036     Low Low
cufflinks 0.119        
cufflinks 0.079        

0 Strain