Gene : Glyma.02G053200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23324:SF71 - PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH2-RELATED Genomic Order:  532
Name:  ? Glyma.02G053200 Secondary Identifier:  ? PAC:30508570
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G053200 0.5kb upstream 0.5kb upstream 6073 true Chr02: 4863464-4869536 Glycine max
Glyma.02G053200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4869037-4869536 Glycine max
Glyma.02G053200 0.5kb downstream 0.5kb downstream 6073 true Chr02: 4862964-4869036 Glycine max
Glyma.02G053200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4862964-4863463 Glycine max
Glyma.02G053200 1.0kb upstream 1.0kb upstream 6573 true Chr02: 4863464-4870036 Glycine max
Glyma.02G053200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4869037-4870036 Glycine max
Glyma.02G053200 1.0kb downstream 1.0kb downstream 6573 true Chr02: 4862464-4869036 Glycine max
Glyma.02G053200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4862464-4863463 Glycine max
Glyma.02G053200 2.0kb upstream 2.0kb upstream 7573 true Chr02: 4863464-4871036 Glycine max
Glyma.02G053200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4869037-4871036 Glycine max
Glyma.02G053200 2.0kb downstream 2.0kb downstream 7573 true Chr02: 4861464-4869036 Glycine max
Glyma.02G053200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4861464-4863463 Glycine max
Glyma.02G053200 5.0kb upstream 5.0kb upstream 10573 true Chr02: 4863464-4874036 Glycine max
Glyma.02G053200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4869037-4874036 Glycine max
Glyma.02G053200 5.0kb downstream 5.0kb downstream 10573 true Chr02: 4858464-4869036 Glycine max
Glyma.02G053200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4858464-4863463 Glycine max
Glyma.02G053200 10.0kb upstream 10.0kb upstream 15573 true Chr02: 4863464-4879036 Glycine max
Glyma.02G053200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4869037-4879036 Glycine max
Glyma.02G053200 10.0kb downstream 10.0kb downstream 15573 true Chr02: 4853464-4869036 Glycine max
Glyma.02G053200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4853464-4863463 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302310 5265 Fabidae View MSA
124068521 5270 Rosid View MSA
123742729 5271 Pentapetalae View MSA
122786942 5272 Eudicot View MSA
122050588 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.089784 0.0 0.35285 Low  
cufflinks 0.0174888 0.0 0.0747005 Low  
cufflinks 20.5362 0.0 55.3698 High High
cufflinks 0.072853 0.0 0.288396 Low  
cufflinks 0.00763626 0.0 0.0350823 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.158253 0.0 0.607888 Low  
cufflinks 0.0697249 0.0 0.27629 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 1.229       High
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 2.902       High
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 0.006     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  

0 Strain