Gene : Glyma.02G053600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE Genomic Order:  536
Name:  ? Glyma.02G053600 Secondary Identifier:  ? PAC:30507627
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G053600 0.5kb upstream 0.5kb upstream 3053 true Chr02: 4889654-4892706 Glycine max
Glyma.02G053600 0.5kb upstream 0.5kb upstream 500 false Chr02: 4892207-4892706 Glycine max
Glyma.02G053600 0.5kb downstream 0.5kb downstream 3053 true Chr02: 4889154-4892206 Glycine max
Glyma.02G053600 0.5kb downstream 0.5kb downstream 500 false Chr02: 4889154-4889653 Glycine max
Glyma.02G053600 1.0kb upstream 1.0kb upstream 3553 true Chr02: 4889654-4893206 Glycine max
Glyma.02G053600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4892207-4893206 Glycine max
Glyma.02G053600 1.0kb downstream 1.0kb downstream 3553 true Chr02: 4888654-4892206 Glycine max
Glyma.02G053600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4888654-4889653 Glycine max
Glyma.02G053600 2.0kb upstream 2.0kb upstream 4553 true Chr02: 4889654-4894206 Glycine max
Glyma.02G053600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4892207-4894206 Glycine max
Glyma.02G053600 2.0kb downstream 2.0kb downstream 4553 true Chr02: 4887654-4892206 Glycine max
Glyma.02G053600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4887654-4889653 Glycine max
Glyma.02G053600 5.0kb upstream 5.0kb upstream 7553 true Chr02: 4889654-4897206 Glycine max
Glyma.02G053600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4892207-4897206 Glycine max
Glyma.02G053600 5.0kb downstream 5.0kb downstream 7553 true Chr02: 4884654-4892206 Glycine max
Glyma.02G053600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4884654-4889653 Glycine max
Glyma.02G053600 10.0kb upstream 10.0kb upstream 12553 true Chr02: 4889654-4902206 Glycine max
Glyma.02G053600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4892207-4902206 Glycine max
Glyma.02G053600 10.0kb downstream 10.0kb downstream 12553 true Chr02: 4879654-4892206 Glycine max
Glyma.02G053600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4879654-4889653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299311 5265 Fabidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3482 0.0 54.5097   High
cufflinks 0.362267 0.0 1.35088    
cufflinks 1.64816 0.0 5.46531    
cufflinks 0.92121 0.0 3.23852    
cufflinks 1.15151 0.0 3.95969    
cufflinks 1.25856 0.0 4.29927    
cufflinks 0.174881 0.0 0.673288 Low Low
cufflinks 0.341471 0.0 1.27562    
cufflinks 0.995868 0.0 3.47761    
cufflinks 2.254        
cufflinks 6.507     High High
cufflinks 2.458        
cufflinks 1.435        
cufflinks 0.539       Low
cufflinks 0.862       Low
cufflinks 1.783        
cufflinks 1.172        
cufflinks 1.729        
cufflinks 1.016        
cufflinks 0.857       Low
cufflinks 2.069        
cufflinks 2.984        
cufflinks 1.89        
cufflinks 4.205       High
cufflinks 0.785       Low
cufflinks 4.125       High

0 Strain