Gene : Glyma.02G058700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31636:SF53 - SCARECROW-LIKE PROTEIN 15 Genomic Order:  587
Name:  ? Glyma.02G058700 Secondary Identifier:  ? PAC:30511081
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G058700 0.5kb upstream 0.5kb upstream 2609 true Chr02: 5266175-5268783 Glycine max
Glyma.02G058700 0.5kb upstream 0.5kb upstream 500 false Chr02: 5266175-5266674 Glycine max
Glyma.02G058700 0.5kb downstream 0.5kb downstream 2609 true Chr02: 5266675-5269283 Glycine max
Glyma.02G058700 0.5kb downstream 0.5kb downstream 500 false Chr02: 5268784-5269283 Glycine max
Glyma.02G058700 1.0kb upstream 1.0kb upstream 3109 true Chr02: 5265675-5268783 Glycine max
Glyma.02G058700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5265675-5266674 Glycine max
Glyma.02G058700 1.0kb downstream 1.0kb downstream 3109 true Chr02: 5266675-5269783 Glycine max
Glyma.02G058700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5268784-5269783 Glycine max
Glyma.02G058700 2.0kb upstream 2.0kb upstream 4109 true Chr02: 5264675-5268783 Glycine max
Glyma.02G058700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5264675-5266674 Glycine max
Glyma.02G058700 2.0kb downstream 2.0kb downstream 4109 true Chr02: 5266675-5270783 Glycine max
Glyma.02G058700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5268784-5270783 Glycine max
Glyma.02G058700 5.0kb upstream 5.0kb upstream 7109 true Chr02: 5261675-5268783 Glycine max
Glyma.02G058700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5261675-5266674 Glycine max
Glyma.02G058700 5.0kb downstream 5.0kb downstream 7109 true Chr02: 5266675-5273783 Glycine max
Glyma.02G058700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5268784-5273783 Glycine max
Glyma.02G058700 10.0kb upstream 10.0kb upstream 12109 true Chr02: 5256675-5268783 Glycine max
Glyma.02G058700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5256675-5266674 Glycine max
Glyma.02G058700 10.0kb downstream 10.0kb downstream 12109 true Chr02: 5266675-5278783 Glycine max
Glyma.02G058700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5268784-5278783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241416 5265 Fabidae Singleton cluster - no MSA
124061987 5270 Rosid View MSA
123738804 5271 Pentapetalae View MSA
122792539 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.6516 0.0 13.259    
cufflinks 1.03913 0.0 3.61203    
cufflinks 12.1306 0.0 32.4947   High
cufflinks 0.615008 0.0 2.22273    
cufflinks 1.67283 0.0 5.44092    
cufflinks 0.257691 0.0 0.972723 Low Low
cufflinks 0.399761 0.0 1.47652   Low
cufflinks 2.25302 0.0 7.09374    
cufflinks 2.59521 0.0 7.98593    
cufflinks 2.926        
cufflinks 3.969        
cufflinks 8.054     High High
cufflinks 1.355        
cufflinks 0.562       Low
cufflinks 0.841       Low
cufflinks 1.126        
cufflinks 3.756        
cufflinks 4.528       High
cufflinks 1.192        
cufflinks 0.951        
cufflinks 2.562        
cufflinks 1.158        
cufflinks 1.073        
cufflinks 4.424       High
cufflinks 0.911        
cufflinks 2.501        

0 Strain