Gene : Glyma.19G004200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11071:SF156 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 Genomic Order:  42
Name:  ? Glyma.19G004200 Secondary Identifier:  ? PAC:30514426
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G004200 0.5kb upstream 0.5kb upstream 16385 true Chr19: 338385-354769 Glycine max
Glyma.19G004200 0.5kb upstream 0.5kb upstream 500 false Chr19: 338385-338884 Glycine max
Glyma.19G004200 0.5kb downstream 0.5kb downstream 16385 true Chr19: 338885-355269 Glycine max
Glyma.19G004200 0.5kb downstream 0.5kb downstream 500 false Chr19: 354770-355269 Glycine max
Glyma.19G004200 1.0kb upstream 1.0kb upstream 16885 true Chr19: 337885-354769 Glycine max
Glyma.19G004200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 337885-338884 Glycine max
Glyma.19G004200 1.0kb downstream 1.0kb downstream 16885 true Chr19: 338885-355769 Glycine max
Glyma.19G004200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 354770-355769 Glycine max
Glyma.19G004200 2.0kb upstream 2.0kb upstream 17885 true Chr19: 336885-354769 Glycine max
Glyma.19G004200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 336885-338884 Glycine max
Glyma.19G004200 2.0kb downstream 2.0kb downstream 17885 true Chr19: 338885-356769 Glycine max
Glyma.19G004200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 354770-356769 Glycine max
Glyma.19G004200 5.0kb upstream 5.0kb upstream 20885 true Chr19: 333885-354769 Glycine max
Glyma.19G004200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 333885-338884 Glycine max
Glyma.19G004200 5.0kb downstream 5.0kb downstream 20885 true Chr19: 338885-359769 Glycine max
Glyma.19G004200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 354770-359769 Glycine max
Glyma.19G004200 10.0kb upstream 10.0kb upstream 25885 true Chr19: 328885-354769 Glycine max
Glyma.19G004200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 328885-338884 Glycine max
Glyma.19G004200 10.0kb downstream 10.0kb downstream 25885 true Chr19: 338885-364769 Glycine max
Glyma.19G004200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 354770-364769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301847 5265 Fabidae View MSA
124062443 5270 Rosid View MSA
123738773 5271 Pentapetalae View MSA
122790926 5272 Eudicot View MSA
122041722 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349576 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.25781 0.0 22.1483   High
cufflinks 5.30853 0.0 14.5954    
cufflinks 6.70819 0.0 18.1157    
cufflinks 5.23616 0.0 14.3866    
cufflinks 6.5393 0.0 17.7421    
cufflinks 5.18504 0.0 14.2971    
cufflinks 4.88502 0.0 13.5462    
cufflinks 4.21962 0.0 11.8317   Low
cufflinks 6.18629 0.0 16.8407    
cufflinks 0.979       Low
cufflinks 2.249       High
cufflinks 1.656        
cufflinks 1.447        
cufflinks 1.733        
cufflinks 1.693        
cufflinks 1.346        
cufflinks 0.619       Low
cufflinks 1.334        
cufflinks 1.476        
cufflinks 1.487        
cufflinks 2.275       High
cufflinks 1.512        
cufflinks 1.235        
cufflinks 1.749        
cufflinks 1.499        
cufflinks 1.66        

0 Strain