Gene : Glyma.02G005400 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  54
Name:  ? Glyma.02G005400 Secondary Identifier:  ? PAC:30510378
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G005400 0.5kb upstream 0.5kb upstream 1727 true Chr02: 593263-594989 Glycine max
Glyma.02G005400 0.5kb upstream 0.5kb upstream 500 false Chr02: 593263-593762 Glycine max
Glyma.02G005400 0.5kb downstream 0.5kb downstream 1727 true Chr02: 593763-595489 Glycine max
Glyma.02G005400 0.5kb downstream 0.5kb downstream 500 false Chr02: 594990-595489 Glycine max
Glyma.02G005400 1.0kb upstream 1.0kb upstream 2227 true Chr02: 592763-594989 Glycine max
Glyma.02G005400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 592763-593762 Glycine max
Glyma.02G005400 1.0kb downstream 1.0kb downstream 2227 true Chr02: 593763-595989 Glycine max
Glyma.02G005400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 594990-595989 Glycine max
Glyma.02G005400 2.0kb upstream 2.0kb upstream 3227 true Chr02: 591763-594989 Glycine max
Glyma.02G005400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 591763-593762 Glycine max
Glyma.02G005400 2.0kb downstream 2.0kb downstream 3227 true Chr02: 593763-596989 Glycine max
Glyma.02G005400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 594990-596989 Glycine max
Glyma.02G005400 5.0kb upstream 5.0kb upstream 6227 true Chr02: 588763-594989 Glycine max
Glyma.02G005400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 588763-593762 Glycine max
Glyma.02G005400 5.0kb downstream 5.0kb downstream 6227 true Chr02: 593763-599989 Glycine max
Glyma.02G005400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 594990-599989 Glycine max
Glyma.02G005400 10.0kb upstream 10.0kb upstream 11227 true Chr02: 583763-594989 Glycine max
Glyma.02G005400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 583763-593762 Glycine max
Glyma.02G005400 10.0kb downstream 10.0kb downstream 11227 true Chr02: 593763-604989 Glycine max
Glyma.02G005400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 594990-604989 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303616 5265 Fabidae View MSA
124069006 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31781 0.0 10.9165   High
cufflinks 0.609573 0.0 2.28609   Low
cufflinks 1.96577 0.0 6.84035    
cufflinks 2.15237 0.0 7.42989    
cufflinks 1.55114 0.0 5.51671    
cufflinks 1.07269 0.0 3.91006    
cufflinks 0.721962 0.0 2.68507   Low
cufflinks 2.31652 0.0 7.93604    
cufflinks 2.12394 0.0 7.35075    
cufflinks 5.009       High
cufflinks 1.099        
cufflinks 1.553        
cufflinks 3.098        
cufflinks 2.607        
cufflinks 0.061       Low
cufflinks 2.986        
cufflinks 0.539        
cufflinks 2.914        
cufflinks 0.506        
cufflinks 4.777       High
cufflinks 1.087        
cufflinks 4.023        
cufflinks 1.155        
cufflinks 1.829        
cufflinks 4.14        
cufflinks 0.426       Low

0 Strain