Gene : Glyma.02G005100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  51
Name:  ? Glyma.02G005100 Secondary Identifier:  ? PAC:30507026
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G005100 0.5kb upstream 0.5kb upstream 5761 true Chr02: 563704-569464 Glycine max
Glyma.02G005100 0.5kb upstream 0.5kb upstream 500 false Chr02: 563704-564203 Glycine max
Glyma.02G005100 0.5kb downstream 0.5kb downstream 5761 true Chr02: 564204-569964 Glycine max
Glyma.02G005100 0.5kb downstream 0.5kb downstream 500 false Chr02: 569465-569964 Glycine max
Glyma.02G005100 1.0kb upstream 1.0kb upstream 6261 true Chr02: 563204-569464 Glycine max
Glyma.02G005100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 563204-564203 Glycine max
Glyma.02G005100 1.0kb downstream 1.0kb downstream 6261 true Chr02: 564204-570464 Glycine max
Glyma.02G005100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 569465-570464 Glycine max
Glyma.02G005100 2.0kb upstream 2.0kb upstream 7261 true Chr02: 562204-569464 Glycine max
Glyma.02G005100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 562204-564203 Glycine max
Glyma.02G005100 2.0kb downstream 2.0kb downstream 7261 true Chr02: 564204-571464 Glycine max
Glyma.02G005100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 569465-571464 Glycine max
Glyma.02G005100 5.0kb upstream 5.0kb upstream 10261 true Chr02: 559204-569464 Glycine max
Glyma.02G005100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 559204-564203 Glycine max
Glyma.02G005100 5.0kb downstream 5.0kb downstream 10261 true Chr02: 564204-574464 Glycine max
Glyma.02G005100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 569465-574464 Glycine max
Glyma.02G005100 10.0kb upstream 10.0kb upstream 15261 true Chr02: 554204-569464 Glycine max
Glyma.02G005100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 554204-564203 Glycine max
Glyma.02G005100 10.0kb downstream 10.0kb downstream 15261 true Chr02: 564204-579464 Glycine max
Glyma.02G005100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 569465-579464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311433 5265 Fabidae View MSA
124060539 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.26461 0.0 9.62683    
cufflinks 4.09976 0.0 11.7969    
cufflinks 1.38278 0.0 4.61942    
cufflinks 3.03437 0.0 9.05832    
cufflinks 1.23262 0.0 4.1431    
cufflinks 0.283905 0.0 1.06329 Low Low
cufflinks 0.586293 0.0 2.10954   Low
cufflinks 11.1099 0.0 29.7148   High
cufflinks 1.59024 0.0 5.19454    
cufflinks 1.95       High
cufflinks 0.309       Low
cufflinks 0.809        
cufflinks 0.502        
cufflinks 0.31       Low
cufflinks 0.477        
cufflinks 1.653       High
cufflinks 0.237       Low
cufflinks 0.856        
cufflinks 2.08       High
cufflinks 1.349        
cufflinks 0.331        
cufflinks 1.295        
cufflinks 0.976        
cufflinks 0.475        
cufflinks 1.447        
cufflinks 0.229       Low

0 Strain