Gene : Glyma.18G298100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11353:SF21 - T-COMPLEX PROTEIN 1 SUBUNIT ZETA Genomic Order:  2981
Name:  ? Glyma.18G298100 Secondary Identifier:  ? PAC:30557168
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G298100 0.5kb upstream 0.5kb upstream 7439 true Chr18: 57571265-57578703 Glycine max
Glyma.18G298100 0.5kb upstream 0.5kb upstream 500 false Chr18: 57571265-57571764 Glycine max
Glyma.18G298100 0.5kb downstream 0.5kb downstream 7439 true Chr18: 57571765-57579203 Glycine max
Glyma.18G298100 0.5kb downstream 0.5kb downstream 500 false Chr18: 57578704-57579203 Glycine max
Glyma.18G298100 1.0kb upstream 1.0kb upstream 7939 true Chr18: 57570765-57578703 Glycine max
Glyma.18G298100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57570765-57571764 Glycine max
Glyma.18G298100 1.0kb downstream 1.0kb downstream 7939 true Chr18: 57571765-57579703 Glycine max
Glyma.18G298100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57578704-57579703 Glycine max
Glyma.18G298100 2.0kb upstream 2.0kb upstream 8939 true Chr18: 57569765-57578703 Glycine max
Glyma.18G298100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57569765-57571764 Glycine max
Glyma.18G298100 2.0kb downstream 2.0kb downstream 8939 true Chr18: 57571765-57580703 Glycine max
Glyma.18G298100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57578704-57580703 Glycine max
Glyma.18G298100 5.0kb upstream 5.0kb upstream 11939 true Chr18: 57566765-57578703 Glycine max
Glyma.18G298100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57566765-57571764 Glycine max
Glyma.18G298100 5.0kb downstream 5.0kb downstream 11939 true Chr18: 57571765-57583703 Glycine max
Glyma.18G298100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57578704-57583703 Glycine max
Glyma.18G298100 10.0kb upstream 10.0kb upstream 16939 true Chr18: 57561765-57578703 Glycine max
Glyma.18G298100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57561765-57571764 Glycine max
Glyma.18G298100 10.0kb downstream 10.0kb downstream 16939 true Chr18: 57571765-57588703 Glycine max
Glyma.18G298100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57578704-57588703 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301458 5265 Fabidae View MSA
124066156 5270 Rosid View MSA
123744812 5271 Pentapetalae View MSA
122790863 5272 Eudicot View MSA
122045313 5273 Angiosperm View MSA
121344896 5274 Embryophyte View MSA
123424625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8075 0.0 53.0652    
cufflinks 38.5864 0.0 108.08 High  
cufflinks 13.2711 0.0 35.4254   Low
cufflinks 26.0545 0.0 70.7316 High  
cufflinks 46.6948 0.0 133.815 High High
cufflinks 27.3764 0.0 74.5163 High  
cufflinks 30.6842 0.0 84.124 High  
cufflinks 30.5161 0.0 83.6776 High  
cufflinks 35.1724 0.0 97.6416 High  
cufflinks 9.092     High  
cufflinks 2.484       Low
cufflinks 7.293     High  
cufflinks 19.137     High High
cufflinks 24.943     High High
cufflinks 3.414        
cufflinks 6.526        
cufflinks 5.224        
cufflinks 7.314     High  
cufflinks 13.48     High High
cufflinks 3.973        
cufflinks 3.944        
cufflinks 5.087        
cufflinks 8.529     High  
cufflinks 2.871       Low
cufflinks 5.261        
cufflinks 5.701        

0 Strain