Gene : Glyma.02G017800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10064//PTHR10064:SF3 - 60S RIBOSOMAL PROTEIN L22 Genomic Order:  178
Name:  ? Glyma.02G017800 Secondary Identifier:  ? PAC:30509403
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G017800 0.5kb upstream 0.5kb upstream 2691 true Chr02: 1562291-1564981 Glycine max
Glyma.02G017800 0.5kb upstream 0.5kb upstream 500 false Chr02: 1564482-1564981 Glycine max
Glyma.02G017800 0.5kb downstream 0.5kb downstream 2691 true Chr02: 1561791-1564481 Glycine max
Glyma.02G017800 0.5kb downstream 0.5kb downstream 500 false Chr02: 1561791-1562290 Glycine max
Glyma.02G017800 1.0kb upstream 1.0kb upstream 3191 true Chr02: 1562291-1565481 Glycine max
Glyma.02G017800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1564482-1565481 Glycine max
Glyma.02G017800 1.0kb downstream 1.0kb downstream 3191 true Chr02: 1561291-1564481 Glycine max
Glyma.02G017800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1561291-1562290 Glycine max
Glyma.02G017800 2.0kb upstream 2.0kb upstream 4191 true Chr02: 1562291-1566481 Glycine max
Glyma.02G017800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1564482-1566481 Glycine max
Glyma.02G017800 2.0kb downstream 2.0kb downstream 4191 true Chr02: 1560291-1564481 Glycine max
Glyma.02G017800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1560291-1562290 Glycine max
Glyma.02G017800 5.0kb upstream 5.0kb upstream 7191 true Chr02: 1562291-1569481 Glycine max
Glyma.02G017800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1564482-1569481 Glycine max
Glyma.02G017800 5.0kb downstream 5.0kb downstream 7191 true Chr02: 1557291-1564481 Glycine max
Glyma.02G017800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1557291-1562290 Glycine max
Glyma.02G017800 10.0kb upstream 10.0kb upstream 12191 true Chr02: 1562291-1574481 Glycine max
Glyma.02G017800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1564482-1574481 Glycine max
Glyma.02G017800 10.0kb downstream 10.0kb downstream 12191 true Chr02: 1552291-1564481 Glycine max
Glyma.02G017800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1552291-1562290 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314771 5265 Fabidae View MSA
124073965 5270 Rosid View MSA
123748426 5271 Pentapetalae View MSA
122787714 5272 Eudicot View MSA
122045649 5273 Angiosperm View MSA
121348582 5274 Embryophyte View MSA
123423882 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.439 0.0 78.7586 High Low
cufflinks 57.7874 0.0 160.85 High  
cufflinks 24.2487 0.0 64.6964 High Low
cufflinks 28.8663 0.0 77.1909 High Low
cufflinks 76.3612 0.0 220.459 High High
cufflinks 82.0533 0.0 238.818 High High
cufflinks 51.8579 0.0 143.187 High  
cufflinks 47.8748 0.0 131.15 High  
cufflinks 57.7337 0.0 160.877 High  
cufflinks 31.054     High  
cufflinks 6.828     High Low
cufflinks 24.418     High  
cufflinks 74.73     High High
cufflinks 115.271     High High
cufflinks 5.131       Low
cufflinks 26.749     High  
cufflinks 19.014     High  
cufflinks 28.129     High  
cufflinks 38.718     High  
cufflinks 13.917     High  
cufflinks 12.101     High  
cufflinks 16.683     High  
cufflinks 33.248     High  
cufflinks 8.834     High Low
cufflinks 22.85     High  
cufflinks 18.067     High  

0 Strain