Gene : Glyma.02G015800 G. max Wm82.a2.v1
Defline:  (1 of 4) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  158
Name:  ? Glyma.02G015800 Secondary Identifier:  ? PAC:30509363
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G015800 0.5kb upstream 0.5kb upstream 9595 true Chr02: 1423023-1432617 Glycine max
Glyma.02G015800 0.5kb upstream 0.5kb upstream 500 false Chr02: 1423023-1423522 Glycine max
Glyma.02G015800 0.5kb downstream 0.5kb downstream 9595 true Chr02: 1423523-1433117 Glycine max
Glyma.02G015800 0.5kb downstream 0.5kb downstream 500 false Chr02: 1432618-1433117 Glycine max
Glyma.02G015800 1.0kb upstream 1.0kb upstream 10095 true Chr02: 1422523-1432617 Glycine max
Glyma.02G015800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1422523-1423522 Glycine max
Glyma.02G015800 1.0kb downstream 1.0kb downstream 10095 true Chr02: 1423523-1433617 Glycine max
Glyma.02G015800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1432618-1433617 Glycine max
Glyma.02G015800 2.0kb upstream 2.0kb upstream 11095 true Chr02: 1421523-1432617 Glycine max
Glyma.02G015800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1421523-1423522 Glycine max
Glyma.02G015800 2.0kb downstream 2.0kb downstream 11095 true Chr02: 1423523-1434617 Glycine max
Glyma.02G015800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1432618-1434617 Glycine max
Glyma.02G015800 5.0kb upstream 5.0kb upstream 14095 true Chr02: 1418523-1432617 Glycine max
Glyma.02G015800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1418523-1423522 Glycine max
Glyma.02G015800 5.0kb downstream 5.0kb downstream 14095 true Chr02: 1423523-1437617 Glycine max
Glyma.02G015800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1432618-1437617 Glycine max
Glyma.02G015800 10.0kb upstream 10.0kb upstream 19095 true Chr02: 1413523-1432617 Glycine max
Glyma.02G015800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1413523-1423522 Glycine max
Glyma.02G015800 10.0kb downstream 10.0kb downstream 19095 true Chr02: 1423523-1442617 Glycine max
Glyma.02G015800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1432618-1442617 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241641 5265 Fabidae Singleton cluster - no MSA
124075126 5270 Rosid View MSA
123628758 5271 Pentapetalae View MSA
122798493 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.818048 0.0 2.89823    
cufflinks 0.532238 0.0 1.94099    
cufflinks 3.65234 0.0 10.7349    
cufflinks 12.2243 0.0 32.6799    
cufflinks 8.0829 0.0 21.9886    
cufflinks 2.4923 0.0 7.74218    
cufflinks 0.0994211 0.0 0.391424 Low Low
cufflinks 25.4393 0.0 68.8846 High High
cufflinks 0.0819493 0.0 0.324621 Low Low
cufflinks 29.857     High High
cufflinks 0.237        
cufflinks 1.806        
cufflinks 0.953        
cufflinks 1.039        
cufflinks 0.152       Low
cufflinks 1.093        
cufflinks 0.317        
cufflinks 11.275     High High
cufflinks 0.35        
cufflinks 0.395        
cufflinks 0.311        
cufflinks 0.546        
cufflinks 0.5        
cufflinks 0.307        
cufflinks 0.871        
cufflinks 0.292        

0 Strain