Gene : Glyma.02G013800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24078//PTHR24078:SF257 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  138
Name:  ? Glyma.02G013800 Secondary Identifier:  ? PAC:30510041
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G013800 0.5kb upstream 0.5kb upstream 5304 true Chr02: 1246969-1252272 Glycine max
Glyma.02G013800 0.5kb upstream 0.5kb upstream 500 false Chr02: 1251773-1252272 Glycine max
Glyma.02G013800 0.5kb downstream 0.5kb downstream 5304 true Chr02: 1246469-1251772 Glycine max
Glyma.02G013800 0.5kb downstream 0.5kb downstream 500 false Chr02: 1246469-1246968 Glycine max
Glyma.02G013800 1.0kb upstream 1.0kb upstream 5804 true Chr02: 1246969-1252772 Glycine max
Glyma.02G013800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1251773-1252772 Glycine max
Glyma.02G013800 1.0kb downstream 1.0kb downstream 5804 true Chr02: 1245969-1251772 Glycine max
Glyma.02G013800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1245969-1246968 Glycine max
Glyma.02G013800 2.0kb upstream 2.0kb upstream 6804 true Chr02: 1246969-1253772 Glycine max
Glyma.02G013800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1251773-1253772 Glycine max
Glyma.02G013800 2.0kb downstream 2.0kb downstream 6804 true Chr02: 1244969-1251772 Glycine max
Glyma.02G013800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1244969-1246968 Glycine max
Glyma.02G013800 5.0kb upstream 5.0kb upstream 9804 true Chr02: 1246969-1256772 Glycine max
Glyma.02G013800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1251773-1256772 Glycine max
Glyma.02G013800 5.0kb downstream 5.0kb downstream 9804 true Chr02: 1241969-1251772 Glycine max
Glyma.02G013800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1241969-1246968 Glycine max
Glyma.02G013800 10.0kb upstream 10.0kb upstream 14804 true Chr02: 1246969-1261772 Glycine max
Glyma.02G013800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1251773-1261772 Glycine max
Glyma.02G013800 10.0kb downstream 10.0kb downstream 14804 true Chr02: 1236969-1251772 Glycine max
Glyma.02G013800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1236969-1246968 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030327 5273 Angiosperm View MSA
122241557 5265 Fabidae Singleton cluster - no MSA
123986401 5270 Rosid Singleton cluster - no MSA
123561755 5271 Pentapetalae Singleton cluster - no MSA
122596543 5272 Eudicot Singleton cluster - no MSA
121299516 5274 Embryophyte View MSA
123426286 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.21654 0.0 0.835114 Low  
cufflinks 0.357634 0.0 1.34965    
cufflinks 0.233861 0.0 0.897794    
cufflinks 0.420428 0.0 1.57328   High
cufflinks 0.125808 0.0 0.495659 Low  
cufflinks 0.0252518 0.0 0.108217 Low Low
cufflinks 0.0830624 0.0 0.332261 Low  
cufflinks 0.120494 0.0 0.47547 Low  
cufflinks 0.29689 0.0 1.12914    
cufflinks 0.019     Low Low
cufflinks 0.028     Low  
cufflinks 0.117     Low  
cufflinks 0.089     Low  
cufflinks 0.27       High
cufflinks 0.016     Low Low
cufflinks 0.144        
cufflinks 0.008     Low Low
cufflinks 0.329       High
cufflinks 0.049     Low  
cufflinks 0.064     Low  
cufflinks 0.033     Low  
cufflinks 0.108        
cufflinks 0.081     Low  
cufflinks 0.036     Low  
cufflinks 0.114        
cufflinks 0.042     Low  

0 Strain