Gene : Glyma.02G025000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF103 - BETA-1,3-GALACTOSYLTRANSFERASE 17-RELATED Genomic Order:  250
Name:  ? Glyma.02G025000 Secondary Identifier:  ? PAC:30508648
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G025000 0.5kb upstream 0.5kb upstream 5732 true Chr02: 2208388-2214119 Glycine max
Glyma.02G025000 0.5kb upstream 0.5kb upstream 500 false Chr02: 2213620-2214119 Glycine max
Glyma.02G025000 0.5kb downstream 0.5kb downstream 5732 true Chr02: 2207888-2213619 Glycine max
Glyma.02G025000 0.5kb downstream 0.5kb downstream 500 false Chr02: 2207888-2208387 Glycine max
Glyma.02G025000 1.0kb upstream 1.0kb upstream 6232 true Chr02: 2208388-2214619 Glycine max
Glyma.02G025000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2213620-2214619 Glycine max
Glyma.02G025000 1.0kb downstream 1.0kb downstream 6232 true Chr02: 2207388-2213619 Glycine max
Glyma.02G025000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2207388-2208387 Glycine max
Glyma.02G025000 2.0kb upstream 2.0kb upstream 7232 true Chr02: 2208388-2215619 Glycine max
Glyma.02G025000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2213620-2215619 Glycine max
Glyma.02G025000 2.0kb downstream 2.0kb downstream 7232 true Chr02: 2206388-2213619 Glycine max
Glyma.02G025000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2206388-2208387 Glycine max
Glyma.02G025000 5.0kb upstream 5.0kb upstream 10232 true Chr02: 2208388-2218619 Glycine max
Glyma.02G025000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2213620-2218619 Glycine max
Glyma.02G025000 5.0kb downstream 5.0kb downstream 10232 true Chr02: 2203388-2213619 Glycine max
Glyma.02G025000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2203388-2208387 Glycine max
Glyma.02G025000 10.0kb upstream 10.0kb upstream 15232 true Chr02: 2208388-2223619 Glycine max
Glyma.02G025000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2213620-2223619 Glycine max
Glyma.02G025000 10.0kb downstream 10.0kb downstream 15232 true Chr02: 2198388-2213619 Glycine max
Glyma.02G025000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2198388-2208387 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313000 5265 Fabidae View MSA
124070105 5270 Rosid View MSA
123744575 5271 Pentapetalae View MSA
122795543 5272 Eudicot View MSA
122042506 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.00795 0.0 6.15781   Low
cufflinks 5.33201 0.0 14.6372    
cufflinks 1.75301 0.0 5.48371   Low
cufflinks 5.36654 0.0 14.7008    
cufflinks 4.07119 0.0 11.409    
cufflinks 6.28986 0.0 17.0579    
cufflinks 14.6544 0.0 39.266   High
cufflinks 3.42688 0.0 9.80953    
cufflinks 5.42072 0.0 14.8437    
cufflinks 1.957        
cufflinks 0.411       Low
cufflinks 2.024        
cufflinks 1.707        
cufflinks 1.897        
cufflinks 3.03        
cufflinks 1.998        
cufflinks 0.517       Low
cufflinks 2.393        
cufflinks 5.015       High
cufflinks 2.306        
cufflinks 0.737        
cufflinks 2.527        
cufflinks 2.542        
cufflinks 0.56       Low
cufflinks 2.248        
cufflinks 0.549       Low

0 Strain