Gene : Glyma.18G300100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11909:SF146 - CASEIN KINASE-LIKE PROTEIN Genomic Order:  3001
Name:  ? Glyma.18G300100 Secondary Identifier:  ? PAC:30557986
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G300100 0.5kb upstream 0.5kb upstream 8032 true Chr18: 57774232-57782263 Glycine max
Glyma.18G300100 0.5kb upstream 0.5kb upstream 500 false Chr18: 57781764-57782263 Glycine max
Glyma.18G300100 0.5kb downstream 0.5kb downstream 8032 true Chr18: 57773732-57781763 Glycine max
Glyma.18G300100 0.5kb downstream 0.5kb downstream 500 false Chr18: 57773732-57774231 Glycine max
Glyma.18G300100 1.0kb upstream 1.0kb upstream 8532 true Chr18: 57774232-57782763 Glycine max
Glyma.18G300100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57781764-57782763 Glycine max
Glyma.18G300100 1.0kb downstream 1.0kb downstream 8532 true Chr18: 57773232-57781763 Glycine max
Glyma.18G300100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57773232-57774231 Glycine max
Glyma.18G300100 2.0kb upstream 2.0kb upstream 9532 true Chr18: 57774232-57783763 Glycine max
Glyma.18G300100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57781764-57783763 Glycine max
Glyma.18G300100 2.0kb downstream 2.0kb downstream 9532 true Chr18: 57772232-57781763 Glycine max
Glyma.18G300100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57772232-57774231 Glycine max
Glyma.18G300100 5.0kb upstream 5.0kb upstream 12532 true Chr18: 57774232-57786763 Glycine max
Glyma.18G300100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57781764-57786763 Glycine max
Glyma.18G300100 5.0kb downstream 5.0kb downstream 12532 true Chr18: 57769232-57781763 Glycine max
Glyma.18G300100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57769232-57774231 Glycine max
Glyma.18G300100 10.0kb upstream 10.0kb upstream 17532 true Chr18: 57774232-57791763 Glycine max
Glyma.18G300100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57781764-57791763 Glycine max
Glyma.18G300100 10.0kb downstream 10.0kb downstream 17532 true Chr18: 57764232-57781763 Glycine max
Glyma.18G300100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57764232-57774231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307523 5265 Fabidae View MSA
124060485 5270 Rosid View MSA
123746473 5271 Pentapetalae View MSA
122796123 5272 Eudicot View MSA
122047943 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.5752 0.0 166.208 High  
cufflinks 26.1006 0.0 94.9969 High Low
cufflinks 55.8486 0.0 217.272 High High
cufflinks 29.7812 0.0 112.141 High  
cufflinks 30.0214 0.0 113.761 High  
cufflinks 26.8032 0.0 98.5774 High Low
cufflinks 30.9172 0.0 117.768 High  
cufflinks 37.6127 0.0 150.297 High  
cufflinks 41.9439 0.0 173.183 High  
cufflinks 4.069       Low
cufflinks 7.495     High High
cufflinks 7.886     High High
cufflinks 3.879       Low
cufflinks 3.438       Low
cufflinks 7.767     High High
cufflinks 4.637        
cufflinks 4.112        
cufflinks 5.436        
cufflinks 4.882        
cufflinks 5.697        
cufflinks 6.057     High  
cufflinks 5.604        
cufflinks 4.056       Low
cufflinks 7.39     High High
cufflinks 4.944        
cufflinks 5.543        

0 Strain