Gene : Glyma.18G300200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Genomic Order:  3002
Name:  ? Glyma.18G300200 Secondary Identifier:  ? PAC:30557321
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G300200 0.5kb upstream 0.5kb upstream 32166 true Chr18: 57788688-57820853 Glycine max
Glyma.18G300200 0.5kb upstream 0.5kb upstream 500 false Chr18: 57788688-57789187 Glycine max
Glyma.18G300200 0.5kb downstream 0.5kb downstream 32166 true Chr18: 57789188-57821353 Glycine max
Glyma.18G300200 0.5kb downstream 0.5kb downstream 500 false Chr18: 57820854-57821353 Glycine max
Glyma.18G300200 1.0kb upstream 1.0kb upstream 32666 true Chr18: 57788188-57820853 Glycine max
Glyma.18G300200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57788188-57789187 Glycine max
Glyma.18G300200 1.0kb downstream 1.0kb downstream 32666 true Chr18: 57789188-57821853 Glycine max
Glyma.18G300200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57820854-57821853 Glycine max
Glyma.18G300200 2.0kb upstream 2.0kb upstream 33666 true Chr18: 57787188-57820853 Glycine max
Glyma.18G300200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57787188-57789187 Glycine max
Glyma.18G300200 2.0kb downstream 2.0kb downstream 33666 true Chr18: 57789188-57822853 Glycine max
Glyma.18G300200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57820854-57822853 Glycine max
Glyma.18G300200 5.0kb upstream 5.0kb upstream 36666 true Chr18: 57784188-57820853 Glycine max
Glyma.18G300200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57784188-57789187 Glycine max
Glyma.18G300200 5.0kb downstream 5.0kb downstream 36666 true Chr18: 57789188-57825853 Glycine max
Glyma.18G300200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57820854-57825853 Glycine max
Glyma.18G300200 10.0kb upstream 10.0kb upstream 41666 true Chr18: 57779188-57820853 Glycine max
Glyma.18G300200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57779188-57789187 Glycine max
Glyma.18G300200 10.0kb downstream 10.0kb downstream 41666 true Chr18: 57789188-57830853 Glycine max
Glyma.18G300200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57820854-57830853 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301991 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.50136 0.0 7.78189   Low
cufflinks 15.8213 0.0 64.7911    
cufflinks 3.60331 0.0 10.8119    
cufflinks 17.96 0.0 65.5286   High
cufflinks 9.33847 0.0 33.7935    
cufflinks 2.55579 0.0 7.97999   Low
cufflinks 17.2116 0.0 72.2263    
cufflinks 9.88825 0.0 31.3069    
cufflinks 11.7876 0.0 44.7667    
cufflinks 1.276        
cufflinks 0.11       Low
cufflinks 0.891        
cufflinks 0.924        
cufflinks 1.327        
cufflinks 0.979        
cufflinks 1.127        
cufflinks 0.371        
cufflinks 1.443        
cufflinks 2.388       High
cufflinks 0.841        
cufflinks 0.184       Low
cufflinks 0.94        
cufflinks 1.129        
cufflinks 0.125       Low
cufflinks 0.94        
cufflinks 0.267       Low

0 Strain