Gene : Glyma.02G027800 G. max Wm82.a2.v1
Defline:  (1 of 8) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase Genomic Order:  278
Name:  ? Glyma.02G027800 Secondary Identifier:  ? PAC:30509676
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G027800 0.5kb upstream 0.5kb upstream 2200 true Chr02: 2497030-2499229 Glycine max
Glyma.02G027800 0.5kb upstream 0.5kb upstream 500 false Chr02: 2497030-2497529 Glycine max
Glyma.02G027800 0.5kb downstream 0.5kb downstream 2200 true Chr02: 2497530-2499729 Glycine max
Glyma.02G027800 0.5kb downstream 0.5kb downstream 500 false Chr02: 2499230-2499729 Glycine max
Glyma.02G027800 1.0kb upstream 1.0kb upstream 2700 true Chr02: 2496530-2499229 Glycine max
Glyma.02G027800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2496530-2497529 Glycine max
Glyma.02G027800 1.0kb downstream 1.0kb downstream 2700 true Chr02: 2497530-2500229 Glycine max
Glyma.02G027800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2499230-2500229 Glycine max
Glyma.02G027800 2.0kb upstream 2.0kb upstream 3700 true Chr02: 2495530-2499229 Glycine max
Glyma.02G027800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2495530-2497529 Glycine max
Glyma.02G027800 2.0kb downstream 2.0kb downstream 3700 true Chr02: 2497530-2501229 Glycine max
Glyma.02G027800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2499230-2501229 Glycine max
Glyma.02G027800 5.0kb upstream 5.0kb upstream 6700 true Chr02: 2492530-2499229 Glycine max
Glyma.02G027800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2492530-2497529 Glycine max
Glyma.02G027800 5.0kb downstream 5.0kb downstream 6700 true Chr02: 2497530-2504229 Glycine max
Glyma.02G027800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2499230-2504229 Glycine max
Glyma.02G027800 10.0kb upstream 10.0kb upstream 11700 true Chr02: 2487530-2499229 Glycine max
Glyma.02G027800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2487530-2497529 Glycine max
Glyma.02G027800 10.0kb downstream 10.0kb downstream 11700 true Chr02: 2497530-2509229 Glycine max
Glyma.02G027800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2499230-2509229 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041440 5273 Angiosperm View MSA
122310325 5265 Fabidae View MSA
124061806 5270 Rosid View MSA
123745217 5271 Pentapetalae View MSA
122786222 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.50506 0.0 5.21302    
cufflinks 0.158863 0.0 0.622825 Low  
cufflinks 0.177061 0.0 0.692481 Low  
cufflinks 0.0569976 0.0 0.232768 Low  
cufflinks 3.35268 0.0 10.445    
cufflinks 13.1006 0.0 35.3566   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0147558 0.0 0.066784 Low Low
cufflinks 1.92596 0.0 6.49805    
cufflinks 0.161        
cufflinks 19.391     High High
cufflinks 0.062     Low Low
cufflinks 3.826        
cufflinks 1.336        
cufflinks 1.658        
cufflinks 0.156        
cufflinks 38.905     High High
cufflinks 0.026     Low Low
cufflinks 0.241        
cufflinks 0.084     Low  
cufflinks 15.758     High High
cufflinks 0.124        
cufflinks 0.33        
cufflinks 38.107     High High
cufflinks 0.094     Low  
cufflinks 15.374     High High

0 Strain