Gene : Glyma.02G026700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED Genomic Order:  267
Name:  ? Glyma.02G026700 Secondary Identifier:  ? PAC:30507193
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G026700 0.5kb upstream 0.5kb upstream 13412 true Chr02: 2399119-2412530 Glycine max
Glyma.02G026700 0.5kb upstream 0.5kb upstream 500 false Chr02: 2399119-2399618 Glycine max
Glyma.02G026700 0.5kb downstream 0.5kb downstream 13412 true Chr02: 2399619-2413030 Glycine max
Glyma.02G026700 0.5kb downstream 0.5kb downstream 500 false Chr02: 2412531-2413030 Glycine max
Glyma.02G026700 1.0kb upstream 1.0kb upstream 13912 true Chr02: 2398619-2412530 Glycine max
Glyma.02G026700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2398619-2399618 Glycine max
Glyma.02G026700 1.0kb downstream 1.0kb downstream 13912 true Chr02: 2399619-2413530 Glycine max
Glyma.02G026700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2412531-2413530 Glycine max
Glyma.02G026700 2.0kb upstream 2.0kb upstream 14912 true Chr02: 2397619-2412530 Glycine max
Glyma.02G026700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2397619-2399618 Glycine max
Glyma.02G026700 2.0kb downstream 2.0kb downstream 14912 true Chr02: 2399619-2414530 Glycine max
Glyma.02G026700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2412531-2414530 Glycine max
Glyma.02G026700 5.0kb upstream 5.0kb upstream 17912 true Chr02: 2394619-2412530 Glycine max
Glyma.02G026700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2394619-2399618 Glycine max
Glyma.02G026700 5.0kb downstream 5.0kb downstream 17912 true Chr02: 2399619-2417530 Glycine max
Glyma.02G026700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2412531-2417530 Glycine max
Glyma.02G026700 10.0kb upstream 10.0kb upstream 22912 true Chr02: 2389619-2412530 Glycine max
Glyma.02G026700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2389619-2399618 Glycine max
Glyma.02G026700 10.0kb downstream 10.0kb downstream 22912 true Chr02: 2399619-2422530 Glycine max
Glyma.02G026700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2412531-2422530 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311868 5265 Fabidae View MSA
124067617 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1479 0.0 45.492    
cufflinks 6.05278 0.0 20.7202   Low
cufflinks 14.2088 0.0 55.1153   High
cufflinks 7.73523 0.0 26.9545    
cufflinks 8.54243 0.0 33.3573    
cufflinks 7.92706 0.0 30.8377    
cufflinks 9.67318 0.0 38.3901    
cufflinks 7.95217 0.0 30.9015    
cufflinks 7.44784 0.0 28.9023    
cufflinks 1.942        
cufflinks 3.556       High
cufflinks 2.661        
cufflinks 2.392        
cufflinks 2.258        
cufflinks 3.684       High
cufflinks 2.457        
cufflinks 1.427       Low
cufflinks 2.641        
cufflinks 2.053        
cufflinks 2.508        
cufflinks 3.442       High
cufflinks 2.75        
cufflinks 1.578       Low
cufflinks 3.812       High
cufflinks 2.721        
cufflinks 2.644        

0 Strain