Gene : Glyma.02G031900 G. max Wm82.a2.v1
Defline:  (1 of 16) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  319
Name:  ? Glyma.02G031900 Secondary Identifier:  ? PAC:30509101
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G031900 0.5kb upstream 0.5kb upstream 3098 true Chr02: 2925089-2928186 Glycine max
Glyma.02G031900 0.5kb upstream 0.5kb upstream 500 false Chr02: 2925089-2925588 Glycine max
Glyma.02G031900 0.5kb downstream 0.5kb downstream 3098 true Chr02: 2925589-2928686 Glycine max
Glyma.02G031900 0.5kb downstream 0.5kb downstream 500 false Chr02: 2928187-2928686 Glycine max
Glyma.02G031900 1.0kb upstream 1.0kb upstream 3598 true Chr02: 2924589-2928186 Glycine max
Glyma.02G031900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2924589-2925588 Glycine max
Glyma.02G031900 1.0kb downstream 1.0kb downstream 3598 true Chr02: 2925589-2929186 Glycine max
Glyma.02G031900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2928187-2929186 Glycine max
Glyma.02G031900 2.0kb upstream 2.0kb upstream 4598 true Chr02: 2923589-2928186 Glycine max
Glyma.02G031900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2923589-2925588 Glycine max
Glyma.02G031900 2.0kb downstream 2.0kb downstream 4598 true Chr02: 2925589-2930186 Glycine max
Glyma.02G031900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2928187-2930186 Glycine max
Glyma.02G031900 5.0kb upstream 5.0kb upstream 7598 true Chr02: 2920589-2928186 Glycine max
Glyma.02G031900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2920589-2925588 Glycine max
Glyma.02G031900 5.0kb downstream 5.0kb downstream 7598 true Chr02: 2925589-2933186 Glycine max
Glyma.02G031900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2928187-2933186 Glycine max
Glyma.02G031900 10.0kb upstream 10.0kb upstream 12598 true Chr02: 2915589-2928186 Glycine max
Glyma.02G031900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2915589-2925588 Glycine max
Glyma.02G031900 10.0kb downstream 10.0kb downstream 12598 true Chr02: 2925589-2938186 Glycine max
Glyma.02G031900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2928187-2938186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300392 5265 Fabidae View MSA
124062757 5270 Rosid View MSA
123750797 5271 Pentapetalae View MSA
122786909 5272 Eudicot View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4059 0.0 45.7922   High
cufflinks 1.65389 0.0 6.02795   Low
cufflinks 1.05688 0.0 4.24066   Low
cufflinks 5.32421 0.0 17.9051    
cufflinks 6.39798 0.0 20.6862    
cufflinks 10.2155 0.0 30.8308    
cufflinks 4.59767 0.0 16.1781    
cufflinks 4.2334 0.0 15.0405    
cufflinks 4.58423 0.0 15.9381    
cufflinks 10.879     High High
cufflinks 0.925       Low
cufflinks 3.258        
cufflinks 7.394     High High
cufflinks 10.582     High High
cufflinks 0.859       Low
cufflinks 2.46        
cufflinks 2.458        
cufflinks 1.441        
cufflinks 2.787        
cufflinks 2.719        
cufflinks 1.427        
cufflinks 2.583        
cufflinks 5.936       High
cufflinks 2.078        
cufflinks 2.162        
cufflinks 1.413        

0 Strain