Gene : Glyma.02G245200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31448:SF3 - IFA-BINDING PROTEIN Genomic Order:  2452
Name:  ? Glyma.02G245200 Secondary Identifier:  ? PAC:30509339
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G245200 0.5kb upstream 0.5kb upstream 5393 true Chr02: 43330484-43335876 Glycine max
Glyma.02G245200 0.5kb upstream 0.5kb upstream 500 false Chr02: 43335377-43335876 Glycine max
Glyma.02G245200 0.5kb downstream 0.5kb downstream 5393 true Chr02: 43329984-43335376 Glycine max
Glyma.02G245200 0.5kb downstream 0.5kb downstream 500 false Chr02: 43329984-43330483 Glycine max
Glyma.02G245200 1.0kb upstream 1.0kb upstream 5893 true Chr02: 43330484-43336376 Glycine max
Glyma.02G245200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43335377-43336376 Glycine max
Glyma.02G245200 1.0kb downstream 1.0kb downstream 5893 true Chr02: 43329484-43335376 Glycine max
Glyma.02G245200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43329484-43330483 Glycine max
Glyma.02G245200 2.0kb upstream 2.0kb upstream 6893 true Chr02: 43330484-43337376 Glycine max
Glyma.02G245200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43335377-43337376 Glycine max
Glyma.02G245200 2.0kb downstream 2.0kb downstream 6893 true Chr02: 43328484-43335376 Glycine max
Glyma.02G245200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43328484-43330483 Glycine max
Glyma.02G245200 5.0kb upstream 5.0kb upstream 9893 true Chr02: 43330484-43340376 Glycine max
Glyma.02G245200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43335377-43340376 Glycine max
Glyma.02G245200 5.0kb downstream 5.0kb downstream 9893 true Chr02: 43325484-43335376 Glycine max
Glyma.02G245200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43325484-43330483 Glycine max
Glyma.02G245200 10.0kb upstream 10.0kb upstream 14893 true Chr02: 43330484-43345376 Glycine max
Glyma.02G245200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43335377-43345376 Glycine max
Glyma.02G245200 10.0kb downstream 10.0kb downstream 14893 true Chr02: 43320484-43335376 Glycine max
Glyma.02G245200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43320484-43330483 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313978 5265 Fabidae View MSA
124070207 5270 Rosid View MSA
123753700 5271 Pentapetalae View MSA
122788125 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.160124 0.0 0.775611 Low Low
cufflinks 3.78975 0.0 13.6765   High
cufflinks 0.243378 0.0 1.49085   Low
cufflinks 1.2887 0.0 6.137    
cufflinks 1.47856 0.0 6.78654    
cufflinks 0.271853 0.0 2.02936 Low Low
cufflinks 1.07302 0.0 4.58859    
cufflinks 2.07657 0.0 7.15087    
cufflinks 1.24058 0.0 5.97952    
cufflinks 0.77        
cufflinks 0.006     Low Low
cufflinks 0.257        
cufflinks 0.733        
cufflinks 0.583        
cufflinks 0.009     Low Low
cufflinks 0.582        
cufflinks 0.034     Low  
cufflinks 0.472        
cufflinks 0.825        
cufflinks 0.403        
cufflinks 0.016     Low Low
cufflinks 0.5        
cufflinks 0.53        
cufflinks 0.008     Low Low
cufflinks 0.497        
cufflinks 0.037     Low  

0 Strain