Gene : Glyma.02G241200 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  2412
Name:  ? Glyma.02G241200 Secondary Identifier:  ? PAC:30509617
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6549 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G241200 0.5kb upstream 0.5kb upstream 6073 true Chr02: 42962096-42968168 Glycine max
Glyma.02G241200 0.5kb upstream 0.5kb upstream 500 false Chr02: 42962096-42962595 Glycine max
Glyma.02G241200 0.5kb downstream 0.5kb downstream 6073 true Chr02: 42962596-42968668 Glycine max
Glyma.02G241200 0.5kb downstream 0.5kb downstream 500 false Chr02: 42968169-42968668 Glycine max
Glyma.02G241200 1.0kb upstream 1.0kb upstream 6573 true Chr02: 42961596-42968168 Glycine max
Glyma.02G241200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42961596-42962595 Glycine max
Glyma.02G241200 1.0kb downstream 1.0kb downstream 6573 true Chr02: 42962596-42969168 Glycine max
Glyma.02G241200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42968169-42969168 Glycine max
Glyma.02G241200 2.0kb upstream 2.0kb upstream 7573 true Chr02: 42960596-42968168 Glycine max
Glyma.02G241200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42960596-42962595 Glycine max
Glyma.02G241200 2.0kb downstream 2.0kb downstream 7573 true Chr02: 42962596-42970168 Glycine max
Glyma.02G241200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42968169-42970168 Glycine max
Glyma.02G241200 5.0kb upstream 5.0kb upstream 10573 true Chr02: 42957596-42968168 Glycine max
Glyma.02G241200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42957596-42962595 Glycine max
Glyma.02G241200 5.0kb downstream 5.0kb downstream 10573 true Chr02: 42962596-42973168 Glycine max
Glyma.02G241200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42968169-42973168 Glycine max
Glyma.02G241200 10.0kb upstream 10.0kb upstream 15573 true Chr02: 42952596-42968168 Glycine max
Glyma.02G241200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42952596-42962595 Glycine max
Glyma.02G241200 10.0kb downstream 10.0kb downstream 15573 true Chr02: 42962596-42978168 Glycine max
Glyma.02G241200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42968169-42978168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307318 5265 Fabidae View MSA
124070230 5270 Rosid View MSA
123744673 5271 Pentapetalae View MSA
122792686 5272 Eudicot View MSA
122045414 5273 Angiosperm View MSA
121351363 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.2544 0.0 446.283 High  
cufflinks 26.1301 0.0 95.9846 High Low
cufflinks 54.6032 0.0 240.541 High  
cufflinks 60.5859 0.0 271.917 High  
cufflinks 133.405 0.0 865.477 High  
cufflinks 165.263 0.0 1014.27 High High
cufflinks 31.4493 0.0 117.759 High Low
cufflinks 66.3071 0.0 320.107 High  
cufflinks 126.721 0.0 804.751 High  
cufflinks 5.333        
cufflinks 7.663     High  
cufflinks 8.101     High  
cufflinks 28.97     High High
cufflinks 20.887     High High
cufflinks 5.391     High  
cufflinks 3.652       Low
cufflinks 10.692     High  
cufflinks 8.31     High  
cufflinks 4.02        
cufflinks 5.798        
cufflinks 10.052     High  
cufflinks 5.257        
cufflinks 2.747       Low
cufflinks 12.027     High  
cufflinks 3.711       Low
cufflinks 13.81     High  

0 Strain