Gene : Glyma.18G292800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12843:SF5 - METHYLTRANSFERASE-LIKE PROTEIN 10 Genomic Order:  2928
Name:  ? Glyma.18G292800 Secondary Identifier:  ? PAC:30558355
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G292800 0.5kb upstream 0.5kb upstream 6552 true Chr18: 57096514-57103065 Glycine max
Glyma.18G292800 0.5kb upstream 0.5kb upstream 500 false Chr18: 57102566-57103065 Glycine max
Glyma.18G292800 0.5kb downstream 0.5kb downstream 6552 true Chr18: 57096014-57102565 Glycine max
Glyma.18G292800 0.5kb downstream 0.5kb downstream 500 false Chr18: 57096014-57096513 Glycine max
Glyma.18G292800 1.0kb upstream 1.0kb upstream 7052 true Chr18: 57096514-57103565 Glycine max
Glyma.18G292800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57102566-57103565 Glycine max
Glyma.18G292800 1.0kb downstream 1.0kb downstream 7052 true Chr18: 57095514-57102565 Glycine max
Glyma.18G292800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57095514-57096513 Glycine max
Glyma.18G292800 2.0kb upstream 2.0kb upstream 8052 true Chr18: 57096514-57104565 Glycine max
Glyma.18G292800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57102566-57104565 Glycine max
Glyma.18G292800 2.0kb downstream 2.0kb downstream 8052 true Chr18: 57094514-57102565 Glycine max
Glyma.18G292800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57094514-57096513 Glycine max
Glyma.18G292800 5.0kb upstream 5.0kb upstream 11052 true Chr18: 57096514-57107565 Glycine max
Glyma.18G292800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57102566-57107565 Glycine max
Glyma.18G292800 5.0kb downstream 5.0kb downstream 11052 true Chr18: 57091514-57102565 Glycine max
Glyma.18G292800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57091514-57096513 Glycine max
Glyma.18G292800 10.0kb upstream 10.0kb upstream 16052 true Chr18: 57096514-57112565 Glycine max
Glyma.18G292800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57102566-57112565 Glycine max
Glyma.18G292800 10.0kb downstream 10.0kb downstream 16052 true Chr18: 57086514-57102565 Glycine max
Glyma.18G292800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57086514-57096513 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308829 5265 Fabidae View MSA
124065361 5270 Rosid View MSA
123737741 5271 Pentapetalae View MSA
122789553 5272 Eudicot View MSA
122041744 5273 Angiosperm View MSA
121347606 5274 Embryophyte View MSA
123380579 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.82161 0.0 27.0022   Low
cufflinks 10.9743 0.0 29.9425    
cufflinks 18.978 0.0 50.6829   High
cufflinks 11.073 0.0 30.2196    
cufflinks 17.0038 0.0 45.4723    
cufflinks 17.1182 0.0 45.7812    
cufflinks 11.1331 0.0 30.3682    
cufflinks 15.7128 0.0 42.1152    
cufflinks 12.3564 0.0 33.4563    
cufflinks 3.051        
cufflinks 0.52       Low
cufflinks 3.519        
cufflinks 4.063       High
cufflinks 5.123       High
cufflinks 0.749       Low
cufflinks 2.246        
cufflinks 1.245        
cufflinks 4.05       High
cufflinks 3.138        
cufflinks 1.754        
cufflinks 1.145        
cufflinks 2.05        
cufflinks 1.925        
cufflinks 0.923       Low
cufflinks 1.627        
cufflinks 1.404        

0 Strain