Gene : Glyma.02G225300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23076:SF70 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED Genomic Order:  2253
Name:  ? Glyma.02G225300 Secondary Identifier:  ? PAC:30509024
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G225300 0.5kb upstream 0.5kb upstream 7634 true Chr02: 41259002-41266635 Glycine max
Glyma.02G225300 0.5kb upstream 0.5kb upstream 500 false Chr02: 41259002-41259501 Glycine max
Glyma.02G225300 0.5kb downstream 0.5kb downstream 7634 true Chr02: 41259502-41267135 Glycine max
Glyma.02G225300 0.5kb downstream 0.5kb downstream 500 false Chr02: 41266636-41267135 Glycine max
Glyma.02G225300 1.0kb upstream 1.0kb upstream 8134 true Chr02: 41258502-41266635 Glycine max
Glyma.02G225300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41258502-41259501 Glycine max
Glyma.02G225300 1.0kb downstream 1.0kb downstream 8134 true Chr02: 41259502-41267635 Glycine max
Glyma.02G225300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41266636-41267635 Glycine max
Glyma.02G225300 2.0kb upstream 2.0kb upstream 9134 true Chr02: 41257502-41266635 Glycine max
Glyma.02G225300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41257502-41259501 Glycine max
Glyma.02G225300 2.0kb downstream 2.0kb downstream 9134 true Chr02: 41259502-41268635 Glycine max
Glyma.02G225300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41266636-41268635 Glycine max
Glyma.02G225300 5.0kb upstream 5.0kb upstream 12134 true Chr02: 41254502-41266635 Glycine max
Glyma.02G225300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41254502-41259501 Glycine max
Glyma.02G225300 5.0kb downstream 5.0kb downstream 12134 true Chr02: 41259502-41271635 Glycine max
Glyma.02G225300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41266636-41271635 Glycine max
Glyma.02G225300 10.0kb upstream 10.0kb upstream 17134 true Chr02: 41249502-41266635 Glycine max
Glyma.02G225300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41249502-41259501 Glycine max
Glyma.02G225300 10.0kb downstream 10.0kb downstream 17134 true Chr02: 41259502-41276635 Glycine max
Glyma.02G225300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41266636-41276635 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122304419 5265 Fabidae View MSA
124063114 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4303 0.0 58.9885   High
cufflinks 6.07571 0.0 21.5247    
cufflinks 12.5014 0.0 43.6856   High
cufflinks 8.17642 0.0 28.5366    
cufflinks 3.80595 0.0 14.3309    
cufflinks 4.16202 0.0 15.7722    
cufflinks 3.86563 0.0 12.5568    
cufflinks 5.69054 0.0 20.2664    
cufflinks 4.225 0.0 15.7054    
cufflinks 1.054        
cufflinks 1.513        
cufflinks 2.517        
cufflinks 0.91        
cufflinks 0.626       Low
cufflinks 1.275        
cufflinks 4.503       High
cufflinks 0.668       Low
cufflinks 1.805        
cufflinks 1.682        
cufflinks 5.801       High
cufflinks 1.238        
cufflinks 5.521       High
cufflinks 3.134        
cufflinks 1.839        
cufflinks 5.596       High
cufflinks 0.901        

0 Strain