Gene : Glyma.02G226500 G. max Wm82.a2.v1
Defline:  (1 of 12) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Genomic Order:  2265
Name:  ? Glyma.02G226500 Secondary Identifier:  ? PAC:30510818
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G226500 0.5kb upstream 0.5kb upstream 6549 true Chr02: 41337759-41344307 Glycine max
Glyma.02G226500 0.5kb upstream 0.5kb upstream 500 false Chr02: 41343808-41344307 Glycine max
Glyma.02G226500 0.5kb downstream 0.5kb downstream 6549 true Chr02: 41337259-41343807 Glycine max
Glyma.02G226500 0.5kb downstream 0.5kb downstream 500 false Chr02: 41337259-41337758 Glycine max
Glyma.02G226500 1.0kb upstream 1.0kb upstream 7049 true Chr02: 41337759-41344807 Glycine max
Glyma.02G226500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41343808-41344807 Glycine max
Glyma.02G226500 1.0kb downstream 1.0kb downstream 7049 true Chr02: 41336759-41343807 Glycine max
Glyma.02G226500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41336759-41337758 Glycine max
Glyma.02G226500 2.0kb upstream 2.0kb upstream 8049 true Chr02: 41337759-41345807 Glycine max
Glyma.02G226500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41343808-41345807 Glycine max
Glyma.02G226500 2.0kb downstream 2.0kb downstream 8049 true Chr02: 41335759-41343807 Glycine max
Glyma.02G226500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41335759-41337758 Glycine max
Glyma.02G226500 5.0kb upstream 5.0kb upstream 11049 true Chr02: 41337759-41348807 Glycine max
Glyma.02G226500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41343808-41348807 Glycine max
Glyma.02G226500 5.0kb downstream 5.0kb downstream 11049 true Chr02: 41332759-41343807 Glycine max
Glyma.02G226500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41332759-41337758 Glycine max
Glyma.02G226500 10.0kb upstream 10.0kb upstream 16049 true Chr02: 41337759-41353807 Glycine max
Glyma.02G226500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41343808-41353807 Glycine max
Glyma.02G226500 10.0kb downstream 10.0kb downstream 16049 true Chr02: 41327759-41343807 Glycine max
Glyma.02G226500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41327759-41337758 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309507 5265 Fabidae View MSA
124071576 5270 Rosid View MSA
123745086 5271 Pentapetalae View MSA
122771361 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04256 0.0 3.69682   Low
cufflinks 4.89311 0.0 14.3205    
cufflinks 6.8765 0.0 19.2923    
cufflinks 27.8502 0.0 74.876 High High
cufflinks 0.539768 0.0 1.99471   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 22.8979 0.0 61.1761 High High
cufflinks 17.9983 0.0 48.0238    
cufflinks 1.8323 0.0 6.13833    
cufflinks 16.167     High High
cufflinks 0.003     Low Low
cufflinks 0.752        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073        
cufflinks 0.805        
cufflinks 0.126        
cufflinks 1.027        
cufflinks 4.246        
cufflinks 1.308        
cufflinks 0.014     Low Low
cufflinks 1.63        
cufflinks 12.923     High High
cufflinks 0.015     Low Low
cufflinks 1.504        
cufflinks 0.044     Low  

0 Strain