Gene : Glyma.02G254200 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  2542
Name:  ? Glyma.02G254200 Secondary Identifier:  ? PAC:30509303
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G254200 0.5kb upstream 0.5kb upstream 2772 true Chr02: 44111732-44114503 Glycine max
Glyma.02G254200 0.5kb upstream 0.5kb upstream 500 false Chr02: 44111732-44112231 Glycine max
Glyma.02G254200 0.5kb downstream 0.5kb downstream 2772 true Chr02: 44112232-44115003 Glycine max
Glyma.02G254200 0.5kb downstream 0.5kb downstream 500 false Chr02: 44114504-44115003 Glycine max
Glyma.02G254200 1.0kb upstream 1.0kb upstream 3272 true Chr02: 44111232-44114503 Glycine max
Glyma.02G254200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44111232-44112231 Glycine max
Glyma.02G254200 1.0kb downstream 1.0kb downstream 3272 true Chr02: 44112232-44115503 Glycine max
Glyma.02G254200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44114504-44115503 Glycine max
Glyma.02G254200 2.0kb upstream 2.0kb upstream 4272 true Chr02: 44110232-44114503 Glycine max
Glyma.02G254200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44110232-44112231 Glycine max
Glyma.02G254200 2.0kb downstream 2.0kb downstream 4272 true Chr02: 44112232-44116503 Glycine max
Glyma.02G254200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44114504-44116503 Glycine max
Glyma.02G254200 5.0kb upstream 5.0kb upstream 7272 true Chr02: 44107232-44114503 Glycine max
Glyma.02G254200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44107232-44112231 Glycine max
Glyma.02G254200 5.0kb downstream 5.0kb downstream 7272 true Chr02: 44112232-44119503 Glycine max
Glyma.02G254200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44114504-44119503 Glycine max
Glyma.02G254200 10.0kb upstream 10.0kb upstream 12272 true Chr02: 44102232-44114503 Glycine max
Glyma.02G254200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44102232-44112231 Glycine max
Glyma.02G254200 10.0kb downstream 10.0kb downstream 12272 true Chr02: 44112232-44124503 Glycine max
Glyma.02G254200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44114504-44124503 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792864 5273 Angiosperm View MSA
122309778 5265 Fabidae View MSA
124064393 5270 Rosid View MSA
123746723 5271 Pentapetalae View MSA
122798692 5272 Eudicot View MSA
121064059 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.36322 0.0 23.0957    
cufflinks 1.26704 0.0 6.89728    
cufflinks 3.56103 0.0 22.1706    
cufflinks 2.01037 0.0 16.4288    
cufflinks 2.364 0.0 13.2808    
cufflinks 0.193533 0.0 0.75809 Low Low
cufflinks 2.82821 0.0 14.9557    
cufflinks 12.17 0.0 52.037   High
cufflinks 9.37291 0.0 48.2551   High
cufflinks 0.303        
cufflinks 1.435       High
cufflinks 0.468        
cufflinks 0.104        
cufflinks 0.018     Low Low
cufflinks 0.958        
cufflinks 0.096     Low  
cufflinks 0.774        
cufflinks 0.492        
cufflinks 0.113        
cufflinks 0.097        
cufflinks 1.328       High
cufflinks 0.131        
cufflinks 0.044     Low Low
cufflinks 1.641       High
cufflinks 0.191        
cufflinks 0.531        

0 Strain