Gene : Glyma.02G240700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  2407
Name:  ? Glyma.02G240700 Secondary Identifier:  ? PAC:30510473
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G240700 0.5kb upstream 0.5kb upstream 7581 true Chr02: 42910921-42918501 Glycine max
Glyma.02G240700 0.5kb upstream 0.5kb upstream 500 false Chr02: 42918002-42918501 Glycine max
Glyma.02G240700 0.5kb downstream 0.5kb downstream 7581 true Chr02: 42910421-42918001 Glycine max
Glyma.02G240700 0.5kb downstream 0.5kb downstream 500 false Chr02: 42910421-42910920 Glycine max
Glyma.02G240700 1.0kb upstream 1.0kb upstream 8081 true Chr02: 42910921-42919001 Glycine max
Glyma.02G240700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42918002-42919001 Glycine max
Glyma.02G240700 1.0kb downstream 1.0kb downstream 8081 true Chr02: 42909921-42918001 Glycine max
Glyma.02G240700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42909921-42910920 Glycine max
Glyma.02G240700 2.0kb upstream 2.0kb upstream 9081 true Chr02: 42910921-42920001 Glycine max
Glyma.02G240700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42918002-42920001 Glycine max
Glyma.02G240700 2.0kb downstream 2.0kb downstream 9081 true Chr02: 42908921-42918001 Glycine max
Glyma.02G240700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42908921-42910920 Glycine max
Glyma.02G240700 5.0kb upstream 5.0kb upstream 12081 true Chr02: 42910921-42923001 Glycine max
Glyma.02G240700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42918002-42923001 Glycine max
Glyma.02G240700 5.0kb downstream 5.0kb downstream 12081 true Chr02: 42905921-42918001 Glycine max
Glyma.02G240700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42905921-42910920 Glycine max
Glyma.02G240700 10.0kb upstream 10.0kb upstream 17081 true Chr02: 42910921-42928001 Glycine max
Glyma.02G240700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42918002-42928001 Glycine max
Glyma.02G240700 10.0kb downstream 10.0kb downstream 17081 true Chr02: 42900921-42918001 Glycine max
Glyma.02G240700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42900921-42910920 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300915 5265 Fabidae View MSA
124066677 5270 Rosid View MSA
123746319 5271 Pentapetalae View MSA
122787337 5272 Eudicot View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.95461 0.0 24.2675    
cufflinks 3.67893 0.0 24.023    
cufflinks 4.30996 0.0 23.6695    
cufflinks 2.77969 0.0 20.157   Low
cufflinks 3.35185 0.0 20.2266    
cufflinks 4.8566 0.0 22.9264   High
cufflinks 2.60896 0.0 15.1594   Low
cufflinks 3.7548 0.0 19.4326    
cufflinks 3.252 0.0 19.8732    
cufflinks 0.121        
cufflinks 0.08       Low
cufflinks 0.174        
cufflinks 0.174        
cufflinks 0.162        
cufflinks 0.087       Low
cufflinks 0.211        
cufflinks 0.109        
cufflinks 0.206        
cufflinks 0.208        
cufflinks 0.202        
cufflinks 0.1       Low
cufflinks 0.227       High
cufflinks 0.203        
cufflinks 0.127        
cufflinks 0.216       High
cufflinks 0.109        

0 Strain