Gene : Glyma.18G293300 G. max Wm82.a2.v1
Defline:  (1 of 18) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  2933
Name:  ? Glyma.18G293300 Secondary Identifier:  ? PAC:30555502
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G293300 0.5kb upstream 0.5kb upstream 4835 true Chr18: 57135949-57140783 Glycine max
Glyma.18G293300 0.5kb upstream 0.5kb upstream 500 false Chr18: 57135949-57136448 Glycine max
Glyma.18G293300 0.5kb downstream 0.5kb downstream 4835 true Chr18: 57136449-57141283 Glycine max
Glyma.18G293300 0.5kb downstream 0.5kb downstream 500 false Chr18: 57140784-57141283 Glycine max
Glyma.18G293300 1.0kb upstream 1.0kb upstream 5335 true Chr18: 57135449-57140783 Glycine max
Glyma.18G293300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57135449-57136448 Glycine max
Glyma.18G293300 1.0kb downstream 1.0kb downstream 5335 true Chr18: 57136449-57141783 Glycine max
Glyma.18G293300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57140784-57141783 Glycine max
Glyma.18G293300 2.0kb upstream 2.0kb upstream 6335 true Chr18: 57134449-57140783 Glycine max
Glyma.18G293300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57134449-57136448 Glycine max
Glyma.18G293300 2.0kb downstream 2.0kb downstream 6335 true Chr18: 57136449-57142783 Glycine max
Glyma.18G293300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57140784-57142783 Glycine max
Glyma.18G293300 5.0kb upstream 5.0kb upstream 9335 true Chr18: 57131449-57140783 Glycine max
Glyma.18G293300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57131449-57136448 Glycine max
Glyma.18G293300 5.0kb downstream 5.0kb downstream 9335 true Chr18: 57136449-57145783 Glycine max
Glyma.18G293300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57140784-57145783 Glycine max
Glyma.18G293300 10.0kb upstream 10.0kb upstream 14335 true Chr18: 57126449-57140783 Glycine max
Glyma.18G293300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57126449-57136448 Glycine max
Glyma.18G293300 10.0kb downstream 10.0kb downstream 14335 true Chr18: 57136449-57150783 Glycine max
Glyma.18G293300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57140784-57150783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250531 5265 Fabidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00396596 0.0 0.0224347 Low Low
cufflinks 0.280964 0.0 1.09544   High
cufflinks 0.0279038 0.0 0.123511 Low  
cufflinks 0.0737856 0.0 0.303864 Low  
cufflinks 0.0773343 0.0 0.317782 Low  
cufflinks 0.0923824 0.0 0.375662 Low  
cufflinks 0.0405906 0.0 0.17482 Low  
cufflinks 0.104709 0.0 0.423737 Low  
cufflinks 0.200882 0.0 0.792728 Low  
cufflinks 0.037     Low Low
cufflinks 0.092        
cufflinks 0.196        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  
cufflinks 0.137        
cufflinks 0.267        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092     Low  
cufflinks 0.228        
cufflinks 0.389       High
cufflinks 0.04     Low Low
cufflinks 0.258        
cufflinks 0.215        
cufflinks 0.018     Low Low
cufflinks 0.343       High
cufflinks 0.026     Low Low

0 Strain