Gene : Glyma.02G268600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11124 - VACUOLAR SORTING PROTEIN VPS29 Genomic Order:  2686
Name:  ? Glyma.02G268600 Secondary Identifier:  ? PAC:30508249
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G268600 0.5kb upstream 0.5kb upstream 4105 true Chr02: 45294068-45298172 Glycine max
Glyma.02G268600 0.5kb upstream 0.5kb upstream 500 false Chr02: 45294068-45294567 Glycine max
Glyma.02G268600 0.5kb downstream 0.5kb downstream 4105 true Chr02: 45294568-45298672 Glycine max
Glyma.02G268600 0.5kb downstream 0.5kb downstream 500 false Chr02: 45298173-45298672 Glycine max
Glyma.02G268600 1.0kb upstream 1.0kb upstream 4605 true Chr02: 45293568-45298172 Glycine max
Glyma.02G268600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45293568-45294567 Glycine max
Glyma.02G268600 1.0kb downstream 1.0kb downstream 4605 true Chr02: 45294568-45299172 Glycine max
Glyma.02G268600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45298173-45299172 Glycine max
Glyma.02G268600 2.0kb upstream 2.0kb upstream 5605 true Chr02: 45292568-45298172 Glycine max
Glyma.02G268600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45292568-45294567 Glycine max
Glyma.02G268600 2.0kb downstream 2.0kb downstream 5605 true Chr02: 45294568-45300172 Glycine max
Glyma.02G268600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45298173-45300172 Glycine max
Glyma.02G268600 5.0kb upstream 5.0kb upstream 8605 true Chr02: 45289568-45298172 Glycine max
Glyma.02G268600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45289568-45294567 Glycine max
Glyma.02G268600 5.0kb downstream 5.0kb downstream 8605 true Chr02: 45294568-45303172 Glycine max
Glyma.02G268600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45298173-45303172 Glycine max
Glyma.02G268600 10.0kb upstream 10.0kb upstream 13605 true Chr02: 45284568-45298172 Glycine max
Glyma.02G268600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45284568-45294567 Glycine max
Glyma.02G268600 10.0kb downstream 10.0kb downstream 13605 true Chr02: 45294568-45308172 Glycine max
Glyma.02G268600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45298173-45308172 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307032 5265 Fabidae View MSA
124071774 5270 Rosid View MSA
123736460 5271 Pentapetalae View MSA
122787236 5272 Eudicot View MSA
122043646 5273 Angiosperm View MSA
121346806 5274 Embryophyte View MSA
123424212 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.661 0.0 195.278 High High
cufflinks 45.4233 0.0 159.232 High  
cufflinks 26.9573 0.0 94.3622 High Low
cufflinks 38.5812 0.0 134.25 High  
cufflinks 37.959 0.0 131.984 High  
cufflinks 44.7715 0.0 156.867 High  
cufflinks 42.5937 0.0 148.732 High  
cufflinks 56.8147 0.0 205.659 High High
cufflinks 34.5341 0.0 119.824 High  
cufflinks 9.373     High High
cufflinks 3.977        
cufflinks 4.612        
cufflinks 6.825        
cufflinks 8.628     High High
cufflinks 2.718       Low
cufflinks 4.791        
cufflinks 4.147        
cufflinks 5.803        
cufflinks 8.248     High High
cufflinks 3.874        
cufflinks 4.518        
cufflinks 4.808        
cufflinks 5.386        
cufflinks 5.258        
cufflinks 4.223        
cufflinks 4.667        

0 Strain