Gene : Glyma.02G271800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12416:SF3 - RRNA-PROCESSING PROTEIN UTP23 HOMOLOG Genomic Order:  2718
Name:  ? Glyma.02G271800 Secondary Identifier:  ? PAC:30506612
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G271800 0.5kb upstream 0.5kb upstream 4809 true Chr02: 45563433-45568241 Glycine max
Glyma.02G271800 0.5kb upstream 0.5kb upstream 500 false Chr02: 45567742-45568241 Glycine max
Glyma.02G271800 0.5kb downstream 0.5kb downstream 4809 true Chr02: 45562933-45567741 Glycine max
Glyma.02G271800 0.5kb downstream 0.5kb downstream 500 false Chr02: 45562933-45563432 Glycine max
Glyma.02G271800 1.0kb upstream 1.0kb upstream 5309 true Chr02: 45563433-45568741 Glycine max
Glyma.02G271800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45567742-45568741 Glycine max
Glyma.02G271800 1.0kb downstream 1.0kb downstream 5309 true Chr02: 45562433-45567741 Glycine max
Glyma.02G271800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45562433-45563432 Glycine max
Glyma.02G271800 2.0kb upstream 2.0kb upstream 6309 true Chr02: 45563433-45569741 Glycine max
Glyma.02G271800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45567742-45569741 Glycine max
Glyma.02G271800 2.0kb downstream 2.0kb downstream 6309 true Chr02: 45561433-45567741 Glycine max
Glyma.02G271800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45561433-45563432 Glycine max
Glyma.02G271800 5.0kb upstream 5.0kb upstream 9309 true Chr02: 45563433-45572741 Glycine max
Glyma.02G271800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45567742-45572741 Glycine max
Glyma.02G271800 5.0kb downstream 5.0kb downstream 9309 true Chr02: 45558433-45567741 Glycine max
Glyma.02G271800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45558433-45563432 Glycine max
Glyma.02G271800 10.0kb upstream 10.0kb upstream 14309 true Chr02: 45563433-45577741 Glycine max
Glyma.02G271800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45567742-45577741 Glycine max
Glyma.02G271800 10.0kb downstream 10.0kb downstream 14309 true Chr02: 45553433-45567741 Glycine max
Glyma.02G271800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45553433-45563432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302524 5265 Fabidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.77441 0.0 33.0606    
cufflinks 10.8844 0.0 38.9135    
cufflinks 5.83163 0.0 20.4621   Low
cufflinks 8.77631 0.0 36.6146    
cufflinks 8.79423 0.0 36.8202    
cufflinks 7.19552 0.0 31.6851    
cufflinks 15.5536 0.0 59.5796   High
cufflinks 7.92832 0.0 30.2642    
cufflinks 9.62238 0.0 35.5551    
cufflinks 0.751        
cufflinks 0.342       Low
cufflinks 0.981        
cufflinks 1.446       High
cufflinks 1.693       High
cufflinks 0.464        
cufflinks 0.924        
cufflinks 0.299       Low
cufflinks 1.002        
cufflinks 1.18        
cufflinks 0.734        
cufflinks 0.403       Low
cufflinks 0.851        
cufflinks 1.054        
cufflinks 0.39       Low
cufflinks 0.861        
cufflinks 0.452        

0 Strain