Gene : Glyma.02G274400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31852:SF0 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  2744
Name:  ? Glyma.02G274400 Secondary Identifier:  ? PAC:30510528
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G274400 0.5kb upstream 0.5kb upstream 2066 true Chr02: 45751520-45753585 Glycine max
Glyma.02G274400 0.5kb upstream 0.5kb upstream 500 false Chr02: 45753086-45753585 Glycine max
Glyma.02G274400 0.5kb downstream 0.5kb downstream 2066 true Chr02: 45751020-45753085 Glycine max
Glyma.02G274400 0.5kb downstream 0.5kb downstream 500 false Chr02: 45751020-45751519 Glycine max
Glyma.02G274400 1.0kb upstream 1.0kb upstream 2566 true Chr02: 45751520-45754085 Glycine max
Glyma.02G274400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45753086-45754085 Glycine max
Glyma.02G274400 1.0kb downstream 1.0kb downstream 2566 true Chr02: 45750520-45753085 Glycine max
Glyma.02G274400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45750520-45751519 Glycine max
Glyma.02G274400 2.0kb upstream 2.0kb upstream 3566 true Chr02: 45751520-45755085 Glycine max
Glyma.02G274400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45753086-45755085 Glycine max
Glyma.02G274400 2.0kb downstream 2.0kb downstream 3566 true Chr02: 45749520-45753085 Glycine max
Glyma.02G274400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45749520-45751519 Glycine max
Glyma.02G274400 5.0kb upstream 5.0kb upstream 6566 true Chr02: 45751520-45758085 Glycine max
Glyma.02G274400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45753086-45758085 Glycine max
Glyma.02G274400 5.0kb downstream 5.0kb downstream 6566 true Chr02: 45746520-45753085 Glycine max
Glyma.02G274400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45746520-45751519 Glycine max
Glyma.02G274400 10.0kb upstream 10.0kb upstream 11566 true Chr02: 45751520-45763085 Glycine max
Glyma.02G274400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45753086-45763085 Glycine max
Glyma.02G274400 10.0kb downstream 10.0kb downstream 11566 true Chr02: 45741520-45753085 Glycine max
Glyma.02G274400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45741520-45751519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299049 5265 Fabidae View MSA
124061418 5270 Rosid View MSA
123742078 5271 Pentapetalae View MSA
122788444 5272 Eudicot View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2672 0.0 28.5232   High
cufflinks 2.32871 0.0 7.86937    
cufflinks 2.06221 0.0 7.1022    
cufflinks 1.37255 0.0 4.87305   Low
cufflinks 4.61713 0.0 14.0452    
cufflinks 3.47736 0.0 11.075    
cufflinks 2.10138 0.0 7.15079    
cufflinks 3.55382 0.0 11.3613    
cufflinks 2.43844 0.0 8.15462    
cufflinks 35.723     High High
cufflinks 8.547     High  
cufflinks 27.156     High  
cufflinks 12.399     High  
cufflinks 1.595       Low
cufflinks 32.502     High High
cufflinks 32.405     High High
cufflinks 23.848     High  
cufflinks 30.788     High High
cufflinks 1.706       Low
cufflinks 15.484     High  
cufflinks 4.974        
cufflinks 12.447     High  
cufflinks 7.18        
cufflinks 4.113        
cufflinks 3.858        
cufflinks 10.208     High  

0 Strain