Gene : Glyma.02G258800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12309 - SEC61 GAMMA SUBUNIT Genomic Order:  2588
Name:  ? Glyma.02G258800 Secondary Identifier:  ? PAC:30507231
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G258800 0.5kb upstream 0.5kb upstream 7148 true Chr02: 44589513-44596660 Glycine max
Glyma.02G258800 0.5kb upstream 0.5kb upstream 500 false Chr02: 44589513-44590012 Glycine max
Glyma.02G258800 0.5kb downstream 0.5kb downstream 7148 true Chr02: 44590013-44597160 Glycine max
Glyma.02G258800 0.5kb downstream 0.5kb downstream 500 false Chr02: 44596661-44597160 Glycine max
Glyma.02G258800 1.0kb upstream 1.0kb upstream 7648 true Chr02: 44589013-44596660 Glycine max
Glyma.02G258800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44589013-44590012 Glycine max
Glyma.02G258800 1.0kb downstream 1.0kb downstream 7648 true Chr02: 44590013-44597660 Glycine max
Glyma.02G258800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44596661-44597660 Glycine max
Glyma.02G258800 2.0kb upstream 2.0kb upstream 8648 true Chr02: 44588013-44596660 Glycine max
Glyma.02G258800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44588013-44590012 Glycine max
Glyma.02G258800 2.0kb downstream 2.0kb downstream 8648 true Chr02: 44590013-44598660 Glycine max
Glyma.02G258800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44596661-44598660 Glycine max
Glyma.02G258800 5.0kb upstream 5.0kb upstream 11648 true Chr02: 44585013-44596660 Glycine max
Glyma.02G258800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44585013-44590012 Glycine max
Glyma.02G258800 5.0kb downstream 5.0kb downstream 11648 true Chr02: 44590013-44601660 Glycine max
Glyma.02G258800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44596661-44601660 Glycine max
Glyma.02G258800 10.0kb upstream 10.0kb upstream 16648 true Chr02: 44580013-44596660 Glycine max
Glyma.02G258800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44580013-44590012 Glycine max
Glyma.02G258800 10.0kb downstream 10.0kb downstream 16648 true Chr02: 44590013-44606660 Glycine max
Glyma.02G258800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44596661-44606660 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313003 5265 Fabidae View MSA
124065252 5270 Rosid View MSA
123752578 5271 Pentapetalae View MSA
122795924 5272 Eudicot View MSA
122042910 5273 Angiosperm View MSA
121349505 5274 Embryophyte View MSA
123424142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.7217 0.0 179.006 High  
cufflinks 68.4388 0.0 227.827 High  
cufflinks 52.4736 0.0 174.672 High  
cufflinks 32.3401 0.0 111.81 High Low
cufflinks 102.021 0.0 354.492 High  
cufflinks 142.974 0.0 525.97 High High
cufflinks 112.601 0.0 397.722 High High
cufflinks 62.4731 0.0 209.729 High  
cufflinks 74.9664 0.0 251.471 High  
cufflinks 6.762        
cufflinks 5.991     High  
cufflinks 4.481        
cufflinks 10.971     High High
cufflinks 14.533     High High
cufflinks 3.843       Low
cufflinks 4.975        
cufflinks 6.638     High  
cufflinks 6.313        
cufflinks 5.732        
cufflinks 4.15       Low
cufflinks 7.268     High  
cufflinks 4.681        
cufflinks 6.35        
cufflinks 8.142     High  
cufflinks 4.767        
cufflinks 6.94     High  

0 Strain