Gene : Glyma.02G293500 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  2935
Name:  ? Glyma.02G293500 Secondary Identifier:  ? PAC:30507516
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-5686 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G293500 0.5kb upstream 0.5kb upstream 3800 true Chr02: 47206622-47210421 Glycine max
Glyma.02G293500 0.5kb upstream 0.5kb upstream 500 false Chr02: 47206622-47207121 Glycine max
Glyma.02G293500 0.5kb downstream 0.5kb downstream 3800 true Chr02: 47207122-47210921 Glycine max
Glyma.02G293500 0.5kb downstream 0.5kb downstream 500 false Chr02: 47210422-47210921 Glycine max
Glyma.02G293500 1.0kb upstream 1.0kb upstream 4300 true Chr02: 47206122-47210421 Glycine max
Glyma.02G293500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47206122-47207121 Glycine max
Glyma.02G293500 1.0kb downstream 1.0kb downstream 4300 true Chr02: 47207122-47211421 Glycine max
Glyma.02G293500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47210422-47211421 Glycine max
Glyma.02G293500 2.0kb upstream 2.0kb upstream 5300 true Chr02: 47205122-47210421 Glycine max
Glyma.02G293500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47205122-47207121 Glycine max
Glyma.02G293500 2.0kb downstream 2.0kb downstream 5300 true Chr02: 47207122-47212421 Glycine max
Glyma.02G293500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47210422-47212421 Glycine max
Glyma.02G293500 5.0kb upstream 5.0kb upstream 8300 true Chr02: 47202122-47210421 Glycine max
Glyma.02G293500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47202122-47207121 Glycine max
Glyma.02G293500 5.0kb downstream 5.0kb downstream 8300 true Chr02: 47207122-47215421 Glycine max
Glyma.02G293500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47210422-47215421 Glycine max
Glyma.02G293500 10.0kb upstream 10.0kb upstream 13300 true Chr02: 47197122-47210421 Glycine max
Glyma.02G293500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47197122-47207121 Glycine max
Glyma.02G293500 10.0kb downstream 10.0kb downstream 13300 true Chr02: 47207122-47220421 Glycine max
Glyma.02G293500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47210422-47220421 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312207 5265 Fabidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.45818 0.0 28.5848    
cufflinks 6.25888 0.0 25.0395    
cufflinks 1.72402 0.0 8.70894   Low
cufflinks 2.53401 0.0 12.0678    
cufflinks 7.80879 0.0 29.6413    
cufflinks 6.79198 0.0 22.7624    
cufflinks 37.0133 0.0 133.449 High High
cufflinks 2.1643 0.0 10.4736    
cufflinks 4.43388 0.0 16.789    
cufflinks 0.519        
cufflinks 0.573        
cufflinks 0.92        
cufflinks 3.524       High
cufflinks 5.084       High
cufflinks 0.185       Low
cufflinks 2.03        
cufflinks 0.833        
cufflinks 0.587        
cufflinks 1.997        
cufflinks 1.095        
cufflinks 0.647        
cufflinks 1.591        
cufflinks 1.998        
cufflinks 0.782        
cufflinks 1.371        
cufflinks 0.89        

0 Strain