Gene : Glyma.02G281200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Genomic Order:  2812
Name:  ? Glyma.02G281200 Secondary Identifier:  ? PAC:30508267
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G281200 0.5kb upstream 0.5kb upstream 5528 true Chr02: 46364805-46370332 Glycine max
Glyma.02G281200 0.5kb upstream 0.5kb upstream 500 false Chr02: 46364805-46365304 Glycine max
Glyma.02G281200 0.5kb downstream 0.5kb downstream 5528 true Chr02: 46365305-46370832 Glycine max
Glyma.02G281200 0.5kb downstream 0.5kb downstream 500 false Chr02: 46370333-46370832 Glycine max
Glyma.02G281200 1.0kb upstream 1.0kb upstream 6028 true Chr02: 46364305-46370332 Glycine max
Glyma.02G281200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46364305-46365304 Glycine max
Glyma.02G281200 1.0kb downstream 1.0kb downstream 6028 true Chr02: 46365305-46371332 Glycine max
Glyma.02G281200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46370333-46371332 Glycine max
Glyma.02G281200 2.0kb upstream 2.0kb upstream 7028 true Chr02: 46363305-46370332 Glycine max
Glyma.02G281200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46363305-46365304 Glycine max
Glyma.02G281200 2.0kb downstream 2.0kb downstream 7028 true Chr02: 46365305-46372332 Glycine max
Glyma.02G281200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46370333-46372332 Glycine max
Glyma.02G281200 5.0kb upstream 5.0kb upstream 10028 true Chr02: 46360305-46370332 Glycine max
Glyma.02G281200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46360305-46365304 Glycine max
Glyma.02G281200 5.0kb downstream 5.0kb downstream 10028 true Chr02: 46365305-46375332 Glycine max
Glyma.02G281200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46370333-46375332 Glycine max
Glyma.02G281200 10.0kb upstream 10.0kb upstream 15028 true Chr02: 46355305-46370332 Glycine max
Glyma.02G281200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46355305-46365304 Glycine max
Glyma.02G281200 10.0kb downstream 10.0kb downstream 15028 true Chr02: 46365305-46380332 Glycine max
Glyma.02G281200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46370333-46380332 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300016 5265 Fabidae View MSA
124062344 5270 Rosid View MSA
123751668 5271 Pentapetalae View MSA
122790470 5272 Eudicot View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7928 0.0 55.1885   High
cufflinks 7.11514 0.0 28.1162    
cufflinks 8.67528 0.0 33.1612    
cufflinks 10.8022 0.0 40.546    
cufflinks 9.6925 0.0 36.9769    
cufflinks 4.14588 0.0 18.2808   Low
cufflinks 10.4474 0.0 40.335    
cufflinks 10.3237 0.0 38.6779    
cufflinks 7.90536 0.0 30.9061    
cufflinks 2.058        
cufflinks 1.517       Low
cufflinks 2.871        
cufflinks 2.688        
cufflinks 3.243       High
cufflinks 2.608        
cufflinks 2.563        
cufflinks 2.045        
cufflinks 3.239       High
cufflinks 3.12        
cufflinks 2.666        
cufflinks 1.721       Low
cufflinks 2.784        
cufflinks 3.568       High
cufflinks 1.623       Low
cufflinks 2.561        
cufflinks 2.131        

0 Strain