Gene : Glyma.02G281700 G. max Wm82.a2.v1
Defline:  (1 of 36) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  2817
Name:  ? Glyma.02G281700 Secondary Identifier:  ? PAC:30508732
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G281700 0.5kb upstream 0.5kb upstream 9849 true Chr02: 46401084-46410932 Glycine max
Glyma.02G281700 0.5kb upstream 0.5kb upstream 500 false Chr02: 46401084-46401583 Glycine max
Glyma.02G281700 0.5kb downstream 0.5kb downstream 9849 true Chr02: 46401584-46411432 Glycine max
Glyma.02G281700 0.5kb downstream 0.5kb downstream 500 false Chr02: 46410933-46411432 Glycine max
Glyma.02G281700 1.0kb upstream 1.0kb upstream 10349 true Chr02: 46400584-46410932 Glycine max
Glyma.02G281700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46400584-46401583 Glycine max
Glyma.02G281700 1.0kb downstream 1.0kb downstream 10349 true Chr02: 46401584-46411932 Glycine max
Glyma.02G281700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46410933-46411932 Glycine max
Glyma.02G281700 2.0kb upstream 2.0kb upstream 11349 true Chr02: 46399584-46410932 Glycine max
Glyma.02G281700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46399584-46401583 Glycine max
Glyma.02G281700 2.0kb downstream 2.0kb downstream 11349 true Chr02: 46401584-46412932 Glycine max
Glyma.02G281700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46410933-46412932 Glycine max
Glyma.02G281700 5.0kb upstream 5.0kb upstream 14349 true Chr02: 46396584-46410932 Glycine max
Glyma.02G281700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46396584-46401583 Glycine max
Glyma.02G281700 5.0kb downstream 5.0kb downstream 14349 true Chr02: 46401584-46415932 Glycine max
Glyma.02G281700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46410933-46415932 Glycine max
Glyma.02G281700 10.0kb upstream 10.0kb upstream 19349 true Chr02: 46391584-46410932 Glycine max
Glyma.02G281700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46391584-46401583 Glycine max
Glyma.02G281700 10.0kb downstream 10.0kb downstream 19349 true Chr02: 46401584-46420932 Glycine max
Glyma.02G281700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46410933-46420932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306974 5265 Fabidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.98747 0.0 13.2904   Low
cufflinks 17.4905 0.0 55.4459   High
cufflinks 11.4524 0.0 39.7739    
cufflinks 16.207 0.0 66.1336    
cufflinks 12.4877 0.0 43.9471    
cufflinks 5.89136 0.0 21.5423   Low
cufflinks 8.64631 0.0 30.9362    
cufflinks 14.9556 0.0 53.3426    
cufflinks 7.41833 0.0 26.0545    
cufflinks 1.657        
cufflinks 0.241       Low
cufflinks 1.717        
cufflinks 1.203        
cufflinks 1.549        
cufflinks 0.317       Low
cufflinks 1.414        
cufflinks 0.606        
cufflinks 2.181       High
cufflinks 2.434       High
cufflinks 1.19        
cufflinks 0.44       Low
cufflinks 1.373        
cufflinks 1.344        
cufflinks 0.356       Low
cufflinks 1.313        
cufflinks 0.478        

0 Strain