Gene : Glyma.02G288500 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  2885
Name:  ? Glyma.02G288500 Secondary Identifier:  ? PAC:30509042
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G288500 0.5kb upstream 0.5kb upstream 6243 true Chr02: 46857283-46863525 Glycine max
Glyma.02G288500 0.5kb upstream 0.5kb upstream 500 false Chr02: 46857283-46857782 Glycine max
Glyma.02G288500 0.5kb downstream 0.5kb downstream 6243 true Chr02: 46857783-46864025 Glycine max
Glyma.02G288500 0.5kb downstream 0.5kb downstream 500 false Chr02: 46863526-46864025 Glycine max
Glyma.02G288500 1.0kb upstream 1.0kb upstream 6743 true Chr02: 46856783-46863525 Glycine max
Glyma.02G288500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46856783-46857782 Glycine max
Glyma.02G288500 1.0kb downstream 1.0kb downstream 6743 true Chr02: 46857783-46864525 Glycine max
Glyma.02G288500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46863526-46864525 Glycine max
Glyma.02G288500 2.0kb upstream 2.0kb upstream 7743 true Chr02: 46855783-46863525 Glycine max
Glyma.02G288500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46855783-46857782 Glycine max
Glyma.02G288500 2.0kb downstream 2.0kb downstream 7743 true Chr02: 46857783-46865525 Glycine max
Glyma.02G288500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46863526-46865525 Glycine max
Glyma.02G288500 5.0kb upstream 5.0kb upstream 10743 true Chr02: 46852783-46863525 Glycine max
Glyma.02G288500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46852783-46857782 Glycine max
Glyma.02G288500 5.0kb downstream 5.0kb downstream 10743 true Chr02: 46857783-46868525 Glycine max
Glyma.02G288500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46863526-46868525 Glycine max
Glyma.02G288500 10.0kb upstream 10.0kb upstream 15743 true Chr02: 46847783-46863525 Glycine max
Glyma.02G288500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46847783-46857782 Glycine max
Glyma.02G288500 10.0kb downstream 10.0kb downstream 15743 true Chr02: 46857783-46873525 Glycine max
Glyma.02G288500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46863526-46873525 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309645 5265 Fabidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.67803 0.0 21.9326    
cufflinks 1.27286 0.0 5.04017    
cufflinks 37.9265 0.0 142.007 High High
cufflinks 1.31084 0.0 7.24662    
cufflinks 1.14719 0.0 4.64984    
cufflinks 4.87654 0.0 19.6595    
cufflinks 1.29822 0.0 5.11889    
cufflinks 0.946707 0.0 4.11939    
cufflinks 1.54657 0.0 5.69405    
cufflinks 0.171       Low
cufflinks 5.384       High
cufflinks 3.001       High
cufflinks 0.263       Low
cufflinks 0.345        
cufflinks 1.482        
cufflinks 0.976        
cufflinks 0.446        
cufflinks 0.55        
cufflinks 0.225       Low
cufflinks 1.143        
cufflinks 2.143        
cufflinks 0.939        
cufflinks 0.682        
cufflinks 5.439       High
cufflinks 1.003        
cufflinks 1.063        

0 Strain